Nocardiopsis sp. LDBS0036: UIS43_03475
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Entry
UIS43_03475 CDS
T11195
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb00061
Fatty acid biosynthesis
nocb00071
Fatty acid degradation
nocb01100
Metabolic pathways
nocb01212
Fatty acid metabolism
nocb02024
Quorum sensing
nocb04146
Peroxisome
Module
nocb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
UIS43_03475
00071 Fatty acid degradation
UIS43_03475
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
UIS43_03475
09145 Cellular community - prokaryotes
02024 Quorum sensing
UIS43_03475
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nocb01004
]
UIS43_03475
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nocb04147
]
UIS43_03475
Enzymes [BR:
nocb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
UIS43_03475
Lipid biosynthesis proteins [BR:
nocb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
UIS43_03475
Exosome [BR:
nocb04147
]
Exosomal proteins
Exosomal proteins of breast milk
UIS43_03475
Exosomal proteins of breast cancer cells
UIS43_03475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF6505
Motif
Other DBs
NCBI-ProteinID:
XEA88513
LinkDB
All DBs
Position
868409..870514
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AA seq
701 aa
AA seq
DB search
MWARGLSGLSDLVYGVATEEAHAEVFSVRGERGRWERVKAGGFATEVTAVAKGLVAAGVG
EGDRIVVVSGSHQDWVRLAFAVWSVRAVLVPLPESVSAERLTHVVRQTRPAAAVVQGERL
LRTVSGLQRELPDLGRVWRMDAGLAGVVSLGAYMDASSVRFRRDGAVAEDVAVVLYPVST
VSRLTRGVVLSHGALLSAAADVVDRMWPRLSELPEGRASTLLDLPLSQISGLASLVACMV
GRVRVGLAGPTGLVRQMEAFKPTVLVCSAQVLQGVFDAERGSARSTGWDSLGTFNAAVES
AVQFDRSPRRSAWQRLSRTMYDWQFSRVRELFGGRVHLAVCWGGGLSDRLDSFFGGVGIP
VVQAFGTAEAGGVFAAGAVGDRVPGTVGRALEGREVWVSREGEIHVRGGAVFSGYWGEGE
ASRSAFREGWLATGYAGEVDADGVVSVAGRLRVQAATEELVGRFVARGADEAPALEGRVL
PESEGRVLEGRPVQEQRRDSEEGVRRRDARALEGRALEASVEQEPGAASDGGSGEMLAVT
AAFAAVDPAGGGEPAVVEPQDQRVERGDAELVAEFEARLRAHPLISQVLVIVEGRPFASA
LVTLVRDQLEYWRLVNGRPLAMAPEEIAGDRELLREVQGLVYEANRSVPRHLAVRSFHVL
AEEFTVQSGLVHASGELRREAVLRAFAEEIDGLYRVRREQQ
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcccggggtctttccgggctgagcgacctggtgtacggggtggccacggaggag
gcccatgcggaggtgttctccgtgcgcggtgagcgcggccggtgggagcgggtgaaggcc
ggcgggttcgccacggaggtgacggcggtcgccaagggtctggtggcggccggtgtgggt
gagggcgaccggatcgtggtggtgtcggggtcgcatcaggactgggtgcggttggcgttc
gccgtgtggtcggtgcgtgcggtgttggtgccgttgccggagtcggtgtcggcggagcgt
ttgacgcatgtggtgcggcagacgcgtccggcggctgcggtggtgcagggtgagcggttg
ttgcgcacggtgtcgggtttgcagcgtgagttgccggacctgggtcgggtgtggcggatg
gacgcgggtctggcgggtgtggtgtcgctgggtgcgtatatggacgcgtcgtcggtgcgg
tttcgtcgggacggggcggtggccgaggatgtggcggtggtgctgtatccggtgagtacg
gtgtcgcggttgacgcggggtgtggtgttgtcgcacggggcgttgttgtcggctgcggcg
gatgtggtggaccggatgtggccgcggttgtcggagttgcctgagggccgggcgagcacg
ttgttggatctgccgttgtcgcagatctcggggttggcttcgttggtggcgtgcatggtg
gggcgtgtgcgtgtggggttggcgggcccgacgggtttggtgcggcagatggaggcgttc
aagccgacggtgctggtgtgttcggcccaggtgttgcagggtgtcttcgatgcggagcgg
gggagtgcgcgttcgacggggtgggactcgttgggcacgttcaacgcggcggtggagtcg
gcggtgcagttcgaccggtcgccgcgcaggagtgcgtggcagcggttgtcgcggacgatg
tatgactggcagttctcccgggtgcgggagttgttcggtggccgggtgcatctggcggtg
tgctggggcggtgggctgtcggaccggttggactccttcttcggcggtgtggggattccg
gtggtgcaggcgttcggtacggccgaggcggggggtgtgttcgcggccggtgctgtgggg
gaccgggttccggggacggtggggcgtgccctggagggtcgtgaggtgtgggtgtcgcgt
gagggcgagatccatgtgcgcggcggtgcggtgttctcggggtactggggtgagggtgag
gcctcgcggagtgcgtttcgtgaggggtggttggcgacggggtacgcgggtgaggtggac
gcggacggggtcgtgagtgtggcgggccggttgcgggtgcaggcggcgacggaggagttg
gtggggcggttcgtggcgcgcggggcggatgaggcgcctgcgttggagggccgtgtgctg
ccggagtctgaggggcgtgtgctggagggtcgtccggtgcaggagcagcggcgtgactcc
gaggagggtgtgcgtcggcgggatgcgcgtgcgttggagggccgcgcgttggaggcttcg
gtggagcaggagcccggtgcggcctcggatgggggttcgggggagatgctggcggtgacg
gcggcgttcgccgcggtggatccggctgggggcggggagcccgccgtggtggagccgcag
gaccagcgtgtggagcggggggacgcggagctggtggcggagttcgaggcgcggttgcgt
gcccatccgttgatcagtcaggtgttggtgatcgtggaggggcggccgttcgcgagtgcg
ttggtgacgttggtgcgtgaccagttggagtactggcggttggtgaacggtcggccgttg
gcgatggctccggaggagatcgcgggggaccgtgagctgctgcgtgaggtgcaggggttg
gtgtacgaggccaatcggagtgtgcctcgtcatctggcggtgcggtcgtttcatgtgttg
gcggaggagttcacggtgcagtcggggttggtgcacgcgtcgggggagttgcggcgtgag
gcggtgttgcgggcgttcgcggaggagatcgacgggttgtaccgggtgcggcgtgagcag
cagtag
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