Nocardiopsis sp. LDBS0036: UIS43_03635
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Entry
UIS43_03635 CDS
T11195
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nocb03016
]
UIS43_03635
Enzymes [BR:
nocb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
UIS43_03635
Transfer RNA biogenesis [BR:
nocb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
UIS43_03635
Prokaryotic type
UIS43_03635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
XEA86623
LinkDB
All DBs
Position
complement(897791..898720)
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AA seq
309 aa
AA seq
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MSVRELVVLGTSSAVPTRRRNHNGYFLRWDTHGVLFDPGEGTQRQMRLAGLAATDITRIC
VTHFHGDHCLGLPGTIQRIARDRVPHTVRVAYPADGQSYWRRLRHATAFHDTDVVLPQPV
GGTGSCLLGESDLRVTALPLRHSTTAYGYRLAEPDGWRMLPERLAAHGVRGPMVGELQRR
GSVTTAQGRRVELADCARPRRGQVMAFVMDTAECEEAVELARGADMLVIESTYLDTEEHL
ARAYGHLTARQAGRVAARAGARTLVLTHISERYEDRDDARFLAEAAAEFDGPLTLAQDLQ
RLPVPPRDS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacgcgaactcgtggtcctgggcacctccagcgcggtgcccacccgccgccgc
aaccacaacggctacttcctgcgctgggacacccacggcgtcctgttcgaccccggcgag
gggacccagcgccagatgcgcctggcgggcctggccgccaccgacatcacccgcatctgc
gtcacccacttccacggcgaccactgcctgggcctgcccggcaccatccagcgcatcgcc
cgcgaccgggtgccccacaccgtgcgcgtggcctaccccgccgacggccagagctactgg
cggcggctgcgccacgccaccgccttccacgacaccgacgtcgtactcccccagccggtc
ggcggcaccggttcctgtctgctgggcgagtcggacctgcgcgtcaccgcgctgccgctg
cgccactcgaccaccgcctacggctaccggctggccgaaccggacggctggcggatgctg
cccgaacggctggccgcccacggcgtgcgcggccccatggtcggcgaactccagcggcgg
gggtcggtcaccaccgcccaggggcgccgcgtggagctggccgactgcgcgcggccgcgc
cggggccaggtcatggcgttcgtgatggacaccgccgagtgcgaggaggcggtcgaactc
gcgcgcggagccgacatgctggtgatcgagtcgacctacctggacaccgaggagcacctg
gcccgcgcctacggccacctgaccgcccgccaggccgggcgcgtggccgcgcgcgccggg
gcgcgcaccctggtgctcacccacatctccgaacgctacgaggaccgcgacgacgcccgc
ttcctcgccgaggccgccgccgagttcgacgggcccctcacgctggcccaggacctgcaa
cgcctgccggtgccgccccgcgactcctga
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