Nocardiopsis sp. LDBS0036: UIS43_04890
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Entry
UIS43_04890 CDS
T11195
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
UIS43_04890
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
ACD
EST1
NAT_N
C1_1
Zn_ribbon_IS1595
DZR
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
XEA86857
LinkDB
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Position
1169599..1170873
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AA seq
424 aa
AA seq
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MRTAYKCRAYPDPAQAAQLGRTFGCVRLVWNKTLADRHTAYHQHGEKTSYKQTDQALTGW
KKTPELAFLSEVSSVPLQQTLRHQHSAFANFFAQRARYPRFKNRSGRQSAHYTRSAFRLR
DGALFLAKHQRPLKVAWSWPETDLAALDPTTVVISREADGRWYATFSVDTDDPDPVPDTG
SEVGVDLGVKDFATLSTGEKIANPRHLERKARNLKRYQRRMARKVKGSNNRRKAKRRVAA
AYRKVRHARQDFLHKTTTRLVREHDLIAIEDLNVRGMTSSARGTVVQPGRNVAQKRGLNR
SVLDAALGEFRRQLEYKAERYGRTLVVVDRWYPSSKTCSKCGYLLDRLSLGTRSWTCPSC
RTRHDRDLNAAKNVLAAGRVAAREAVSGDACGAGVSRQGASLPLSAAKQETGPVRVAARA
APGF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcggacggcgtacaagtgccgggcctacccggaccccgcacaagcggcccaactgggt
cgcacgttcggatgcgtgcgcctggtctggaacaagaccctcgccgaccgccacaccgcc
taccaccagcacggagagaagacctcctacaagcagaccgaccaggcgctgaccgggtgg
aagaagacccctgagctggcgttcttgtccgaggtgtcctcggttcccttgcagcagacc
ctgcgccaccaacacagcgcgttcgcgaacttcttcgcccaacgcgcccgctacccccgg
ttcaagaaccggtccggtcggcagtcggcgcactacacccgcagcgcgtttcgcctccgc
gacggtgcgctgttcctggccaaacaccagaggccgctgaaggtggcctggtcctggccc
gagacagacctggccgccctggacccgaccacggtggtcatctcgcgtgaggcggacggg
cgctggtatgcgaccttctccgtggacaccgacgaccccgaccccgtaccggacaccggt
tctgaggtgggtgtggacctgggagtgaaggacttcgcgaccctgtccacgggcgagaag
atcgccaacccccgccacctggagcgcaaagcccgcaacctcaagcgttaccaacgacgc
atggcacgcaaggtgaaaggctcgaacaaccgccgcaaggccaagcgcagggtcgcggcc
gcgtaccgcaaggtccgccacgccagacaggatttcctgcacaagaccaccacccgcctg
gtgcgcgaacacgacctgatcgcgatcgaggacctgaacgtgcggggcatgacctcctcc
gcacgcggcaccgtcgtccagccgggaaggaacgtcgcgcaaaagcgtggcctgaaccgg
tcggtgctcgatgccgctctgggtgagttccgccgccaactggagtacaaggccgaacgc
tacggtcgaaccctcgtggtggtcgaccggtggtatccctcctcgaagacctgctcgaag
tgcgggtacctgctggatcggctttcgctgggcacccggtcgtggacgtgcccttcctgt
cgcacccgacatgatcgggacctcaacgcggccaagaacgttcttgcggctggtcgagtc
gcagcccgagaagcagtctcgggtgatgcctgtggagctggtgtgagtcggcaaggggcc
tcccttccgctgtcggctgcgaagcaggaaaccggacccgtgagggtcgctgcgcgagcg
gcaccaggcttttag
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