Nocardiopsis sp. LDBS0036: UIS43_05070
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Entry
UIS43_05070 CDS
T11195
Name
(GenBank) SNF2-related protein
Organism
nocb Nocardiopsis sp. LDBS0036
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
XEA88531
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Position
1213486..1216587
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AA seq
1033 aa
AA seq
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MRVLHGVWAGDALAVWAESDRAGSSPSTPPPAGGAHGRARPHPFALGARDLSALLVDAGI
GADSAAHGTLDLSLPGDTSAPFPSTRAPGTAPAAFHPWRVPALRLDAASAEALLAAPARD
IPGTASGPSLAHLRAVRDFAELLVTSGCVLPDLVGDPARARWRPAPLDWAEEHLAALTGA
LPPSARAHLPGEPPDAIARACVLAPLELLTDAAARRLVRPRRAHRARTDPADQGRTDPVD
QSRTDPAGQGRTSPEQTSDDGAAPGQRLAAALTGAPDGIGADTAARLRGPLREWRSRVRG
AGRAALLFLLREPDRAGPWALEFWVRSVSDPGLRLPLEQVWQGEGAAWLPADVGATALAD
LRRAARHHPPLRRALRDLAPARLLMSTEDAERFVAEGAARLSGAGFGVVLPEWRGRPALG
LRVAVEEAPRRRGGGGVGPSELVNVSFEALLQGRDGEESVPLGEDELAELAELAHLKRSL
VRVRGRWLEVDPERLSATLDLVKRRGGHWMRTDEALRTAIGVEGTTPLPVADAVASGPLG
ALLDGGAKAEPRPMGTPSGFRGSLRPYQDRGASWLRFLGELGLGAVLADDMGLGKTVQLL
ALLTDERLREPAPGPTLLVCPVSLVGNWRREAERFAPSLRVHVQHGPDRPSGNALARLVG
SCDLVVTTYGVVTRDSEELAGMPWHRVVCDEAQALKNHGTRQARAVRSLPAATRIALTGT
PVENNLGELWSVMEFANPGLLGTAAAFERAVEGEEGPDTALVRRMTGPFVLRRLKTDRSI
IADLPEKLEMRTWCTLTPEQASLYKAVVDEMGERLAEATEKERKGLVLATMSRLKQICNH
PAQFLGDGSALSGRSGKLERVEAILASAAAEGDKALCFTQYARFGERLAPYLRSRLGVPV
LWLHGGTPRAEREEMTQRFQEMEGPAVFLLSLKAAGTGLNLTAANHVVHVDRWWNPAVEN
QATDRAFRIGQRRDVQVRKMVCVGTVEERVDEMIERKSALADGAVATGEAWLTGLSVQDL
REVVRLSPEAVAE
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggttctgcacggcgtgtgggccggagacgcgctggcggtgtgggccgagtccgac
cgggccgggtcctccccctccacccctcctccggccgggggcgcgcacggccgtgcgcgc
ccgcacccgttcgccctgggggcccgcgacctgagcgcactcctggtggacgcggggatc
ggggcggactccgccgcgcacggcaccctggacctgtccctgcccggggacacctccgcc
cccttcccctccacccgcgcccccggcaccgcaccggccgccttccacccctggcgggtg
cccgccctgcggctggacgccgcctccgccgaggccctcctggccgcacccgcacgcgac
atccccggcaccgcctccggtccctcgctggcccatctgcgcgcggtccgcgacttcgcc
gaactcctggtcacctccgggtgcgtgctgcccgacctggtgggcgaccccgcccgggcc
cgctggcggcccgcgccgctggactgggcggaggagcacctggccgcgctcaccggcgcc
ctgccgccctccgcccgcgcccacctgcccggggagccgcccgacgcgatcgcccgggcc
tgcgtgctcgcccccctggaactgctcaccgacgcggcggcccgccgcctggtccggccc
cgccgcgcgcaccgggcccggaccgacccggcagaccagggccggaccgacccagtggac
cagtcccggaccgacccggcaggccagggccggaccagcccggaacagacctccgacgac
ggcgccgcccccggccagcggctggccgccgcgctcaccggcgccccggacgggatcggc
gccgacaccgccgcccggctgcgcggacccctgcgcgagtggcgctcgcgggtgcgcggc
gcggggcgggcggcgctgctgttcctgctgcgcgaacccgaccgcgcggggccgtgggca
ctggagttctgggtgcgctcggtcagcgaccccggcctgcgcctgcccctggaacaggtg
tggcagggcgagggcgccgcctggctgcccgccgacgtgggcgccaccgccctggccgat
ctgcgccgggccgcgcgccaccatccgccgctgcgccgcgcgctgcgcgacctggccccg
gcccggctgctgatgagcacggaggacgccgagcggttcgtggccgagggcgccgcccgg
ctgagcggcgccgggttcggggtggtcctgcccgagtggcgcggcaggcccgccctgggc
ctgcgggtggcggtcgaggaggcgccccgccgacgcgggggcggcggggtgggcccctcc
gagctggtcaacgtgtccttcgaggccctgctccaggggcgcgacggcgaggagtccgta
ccgctcggcgaggacgagctggccgaactcgccgagctggcccacctcaagcgttcgctg
gtgcgcgtgcgcggccggtggctggaggtggaccccgagcggctcagcgccaccctggac
ctggtcaagcggcgcggcggccactggatgcgcaccgacgaggcgctgcgcacggccatc
ggggtggagggcaccactcccctgccggtggccgacgcggtcgcctccggtccgctgggc
gcgctgctggacgggggcgccaaggccgagcctcgcccgatgggcacaccgtccggtttc
cggggttcgctgcgcccctaccaggaccggggcgcgtcgtggctgcgcttcctgggcgag
ttgggcctgggcgcggtcctggccgacgacatgggcctgggcaagaccgtgcagctgctg
gccctgctcaccgacgagcggctgcgcgaacccgctccggggccgaccctgctggtgtgc
ccggtctcgctcgtgggcaactggcgtcgcgaggccgagcggttcgcgccctcgctgcgg
gtgcacgtccagcacggcccggaccggccctcgggcaacgccctggcccgcctggtgggc
tcgtgcgacctggtcgtcaccacctacggcgtggtcacccgcgacagcgaggagctggcg
ggcatgccctggcaccgggtggtgtgcgacgaggctcaggcgctcaagaaccacggcacc
cggcaggcccgcgcggtgcggtcgctgcccgcggccacgcggatcgcgctcaccggcacc
ccggtggagaacaacctgggcgagctgtggtcggtgatggagttcgccaacccggggctg
ctgggcacggcggcggccttcgagcgggcggtcgagggcgaggaggggcccgacaccgcg
ctggtgcgccgcatgaccgggccgttcgtgctgcgccgcctcaagaccgaccggtcgatc
atcgccgacctgcccgagaagctggagatgcgcacctggtgcacgctcaccccggaacag
gcctcgctgtacaaggcggtggtggacgagatgggcgagcggctggccgaggcgacagag
aaggagcgcaaggggctggtgctggcgacgatgtcgcggctcaagcagatctgcaaccac
ccggcgcagttcctgggggacggctcggcgctgtcggggcgctcgggcaagctggagcgg
gtggaggcgatcctggcctcggccgcggccgagggcgacaaggccctgtgcttcacccag
tacgcgcgcttcggtgagcgcctggccccctacctgcgttcgcgtctgggggtgccggtg
ctgtggctgcacgggggcactccgcgggcggagcgggaggagatgacgcagcgcttccag
gagatggagggcccggcggtgttcctgctctcgctcaaggccgccgggacggggctgaac
ctgaccgcggccaaccacgtggtgcacgtggaccgctggtggaacccggcggtggagaac
caggccaccgaccgggcgttccggatcggccagcggcgggacgtgcaggtgcgcaagatg
gtgtgcgtgggcacggtcgaggagcgggtggacgagatgatcgagcgcaagagcgcgctg
gccgacggcgccgtggccaccggtgaggcgtggctgaccgggttgtccgtccaggacctg
cgcgaggtcgtgcggttgtccccggaggcggtggccgagtga
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