Nocardiopsis sp. LDBS0036: UIS43_05965
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Entry
UIS43_05965 CDS
T11195
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
nocb Nocardiopsis sp. LDBS0036
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
HTH_23
HTH_31
HTH_38
RecJ_C_Deinoc
HTH_Tnp_ISL3
HTH_3
Motif
Other DBs
NCBI-ProteinID:
XEA87063
LinkDB
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Position
complement(1409682..1410602)
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AA seq
306 aa
AA seq
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MSPISPLPERTGSAPPGTAAPSGEGAGLGTWRREPSTLVRRAAPLPEGAAAPFVIIAESH
APGAPAEWEPHAHPAHELVWVRCGALTARVGDRVFTVSEGCGLWVPAGEVHAGRLTAGAE
LHTAFFAPDRTPVAFEGPTAIAMTPVLESLLMRLARTDLDAGARSRAEAVVFDVLEPSLP
QLALRLPGEARADVIADALLRDPADDRSLEEWARDLGVSPRTISRAFRAATGLSFAQWRQ
SLRIHRALLLLGEGREVQDAAELLGYAQTSTFIDAFRRVMGTTPGTYFGPSRAAVDRNSV
SGVRKS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatatctccgcttccggagcgtaccggcagcgcaccgcccgggacggccgcg
ccctccggggagggcgcgggtctgggcacctggcggcgcgagccgagcaccctggtgcgg
cgggccgccccgcttccggagggggccgcggcgcccttcgtgatcatcgcggagtcccac
gcgccgggcgcccccgcggagtgggagccgcacgcgcaccccgcgcacgaactggtgtgg
gtgcgctgcggggcgctgaccgcccgcgtcggcgaccgcgtcttcaccgtctccgagggg
tgcgggctgtgggtgcccgccggggaggtgcacgccggccggctgacggccggggccgaa
ctccacaccgccttcttcgccccggaccgcacgccggtcgccttcgagggccccacggcc
atcgcgatgaccccggtgctggagtcactgctgatgcgcctggcccgcaccgacctggac
gccggggcgcgctcgcgcgcggaggcggtggtgttcgacgtgctggagccgtcgctgccc
cagctcgcgctgcgcctgcccggcgaggcccgggccgacgtgatcgccgacgccctgctg
cgcgaccccgccgacgaccgctccctggaggagtgggcgcgcgacctgggcgtgagcccc
cgcacgatcagccgcgccttccgcgccgccaccgggctctcgttcgcgcagtggcggcag
tcactgcgcatccaccgggcgctcctgctgctcggcgaggggcgcgaggtgcaggacgcc
gccgaactcctcggatacgcccagaccagcaccttcatcgacgccttccggcgcgtgatg
ggcaccaccccggggacgtacttcggcccttcccgggcggccgttgaccggaattccgta
tccggtgtccggaagtcctga
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