Nocardiopsis sp. LDBS0036: UIS43_08785
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Entry
UIS43_08785 CDS
T11195
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nocb03009
]
UIS43_08785
Enzymes [BR:
nocb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
UIS43_08785
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
UIS43_08785
Ribosome biogenesis [BR:
nocb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
UIS43_08785
23S rRNA modification factors
UIS43_08785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
XEA87593
LinkDB
All DBs
Position
complement(2108119..2108919)
Genome browser
AA seq
266 aa
AA seq
DB search
MAKRTRLDAELVRRGHARSRGHAAEIIEGGFVKVAGIVASKAATQVGQDQPIVVRPPSDE
PPYVSRGAHKLIGALDAFEFDVADRRALDAGASTGGFTDVLLRRRAAHVTAVDVGYGQLA
WSLRSNDRVRVMERVNVRELTPEQIGEPRPDLVVGDLSFISLRLVLGALRGCVAADADFL
LMVKPQFEVGKDKVGAGGVVREPELRAEAVSDVAAHALTLGLGTVGVTASPLPGPSGNVE
YFLWMRAGAAPLDPDALARAVEEGPR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgcacccggctcgacgcggaactggtccgccgcgggcacgcacgctcccgt
ggacacgccgccgagatcatcgagggcgggttcgtcaaggtcgcggggatcgtggcctcc
aaggccgcgacccaggtcggccaggaccagcccatcgtggtccgtccaccctccgacgag
cccccctacgtctcccgcggcgcccacaagctcatcggggccctcgacgccttcgagttc
gacgtcgccgaccgcagggccctggacgcgggcgcctccaccggcgggttcaccgacgtg
ctgctgcgccgcagggcggcccacgtcaccgcggtggacgtgggctacggccagctcgcc
tggtcgctgcgcagcaacgaccgcgtgcgcgtgatggagcgggtcaacgtccgtgagctc
acccccgagcagatcggcgagccccgccccgacctggtcgtgggcgacctgtcgttcatc
tcgctgcgcctggtgctgggggcgctgcggggctgcgtggccgccgacgccgacttcctg
ctcatggtcaagccccagttcgaggtgggcaaggacaaggtcggcgccgggggagtggtc
cgcgagccggagctgcgcgccgaggccgtctccgacgtcgccgcgcacgccctcaccctg
gggctgggcaccgtcggcgtcaccgccagccccctgccgggcccctccggcaacgtcgag
tacttcctgtggatgcgcgcgggggccgcgcccctggacccggacgcgttggcccgggcc
gtggaggagggaccgcgttag
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