KEGG   Nocardiopsis sp. LDBS0036: UIS43_10370
Entry
UIS43_10370       CDS       T11195                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
nocb  Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:nocb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nocb03400]
    UIS43_10370
Enzymes [BR:nocb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     UIS43_10370
DNA repair and recombination proteins [BR:nocb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    UIS43_10370
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Asparaginase_C SecA_DEAD
Other DBs
NCBI-ProteinID: XEA87876
LinkDB
Position
complement(2473899..2475983)
AA seq 694 aa
MADLPDVPTLLDAAVAALGGSRREGQATMAGAVAEAVDKREHLVVQAGTGTGKSLAYLVP
AIRHAMAKESTVVVSTATIALQNQLIERDLPRLAKALTPMLPREPTFAVLKGRRNYLCRN
RLQTAGEEAEDTELFDPRQLSSLGRQVARLHEWAEDTVTGDRDELVPGVSDLAWRQVSVA
ANECMGARICPFGQECFAEFAREATQGVDVVVTNHAMLSIDMSQGYHILPEHNTIMIDEA
HELVDRATSVATGVLGERTVNAAAKRAARLVEPGISERLTECADGLALMFTESPDGRLDH
IDDALANAVAATRDTASACVTAIGPSPGELDPDGASDRRLALAALGEVHDTAVRVLESFE
PALRDRTEVVWLTKTPGRQPALHVAPLGVGGLLREKLFGDRTVVLTSATLTLGGSFASLA
NQWGLGREVAQEAAERAAAGRGPEPAEPRDEDGPDDEDGPHRAAGEPRWRALDVGSPFEH
ARRGILYVATHLPPPGRDGLAPAYLDEISELIEAADGRALGLFSSMRAAQQAAEELRERL
DQPILCQGEDSTGQLVRRFAEEERSCLFGTLSLWQGVDVPGPSLSLVIVDRIPFPRPDDP
LASARQRAVAAHGGNGFLSVAATHAALLLAQGTGRLLRSTEDRGVIAVLDPRLATARYGG
FLRASLPPYWGTTDPAVARSALRRLAGQPEPAAG
NT seq 2085 nt   +upstreamnt  +downstreamnt
gtggcagatctccccgacgttcccaccctgctcgacgcggctgtcgccgccctgggcggc
agccgccgcgagggccaggcgaccatggccggtgccgtggccgaggcggtcgacaagcgc
gaacacctggtggtccaggccggtaccggcaccggaaagtccctggcctacctggtgccc
gcgatcagacacgccatggccaaggagagcacggtggtggtctccaccgccaccatcgcc
ctgcagaaccagctcatcgagcgcgacctgccgcgcctggccaaggccctcacgccgatg
ctgccccgcgagcccacgttcgccgtgctcaagggccgccgcaactacctgtgccgcaac
cggctccagaccgctggcgaggaggccgaggacaccgagctgttcgacccgcgccagctc
tcctcgctgggccggcaggtggcacgcctgcacgagtgggccgaggacaccgtcaccggc
gaccgcgacgaactcgtgcccggcgtcagcgacctggcctggcgccaggtgtcggtggcc
gccaacgagtgcatgggcgcccgcatctgccccttcggccaggagtgcttcgccgagttc
gcccgcgaggccacccagggcgtggacgtggtggtcaccaaccacgccatgctctccatc
gacatgtcgcagggctaccacatcctgcccgagcacaacacgatcatgatcgacgaggcg
cacgaactcgtcgaccgcgccacctccgtggccaccggcgtcctgggcgagcgcaccgtc
aacgccgcggccaagcgcgccgcccgcctggtcgaacccgggatcagcgaacgcctgacc
gagtgcgccgacggcctcgccctgatgttcaccgagtcgcccgacggacgcctggaccac
atcgacgacgccctggccaacgcggtcgccgccacccgcgacaccgcctcggcctgcgtc
accgccatcggcccctcacccggggagctggacccggacggcgccagcgaccgccgcctg
gccctggccgcgctcggcgaggtgcacgacaccgccgtgcgcgtcctggagtccttcgaa
cccgccctgcgcgaccgcaccgaggtcgtctggctgaccaagacccccggacgccaaccc
gcgctccacgtcgccccgctcggcgtgggcggactgctgcgcgagaagctcttcggcgac
cgcaccgtggtgctgacctccgccaccctcaccctgggcggctccttcgcctcgctggcc
aaccagtggggcctgggccgcgaggtggcccaggaggccgccgagcgcgccgccgcgggc
cgcggcccggaaccggccgaaccccgggacgaggacggtcccgacgacgaggacggcccg
caccgcgcggccggggagccccgctggcgcgcgctggacgtcggctcgcccttcgagcac
gcccgcaggggcatcctctacgtggccacccacctgccgccgcccggccgcgacggcctc
gcgcccgcctacttggacgagatcagcgaactcatcgaggccgccgacggccgcgcgctg
ggcctgttctcctccatgcgcgccgcccagcaggccgcagaggaactccgcgagcgcctg
gaccagccgatcctgtgccagggggaggactccaccgggcagctggtgcgccgcttcgcc
gaggaggagcggtcctgcctgttcggcaccctgtcgctgtggcagggcgtggacgtgccc
ggaccctcgctgtccctggtgatcgtggaccgcatccccttcccccggcccgacgacccg
ctggcctccgcgcgccagcgcgcggtcgccgcgcacgggggcaacggcttcctgtcggtg
gccgccacccatgccgccctgctgctcgcccagggcaccgggcgcctgctgcgctccacc
gaggaccggggggtcatcgccgtcctggacccgcgcctggccacggcccgctacggcggc
ttcctgcgcgcctccctgccgccctactgggggaccaccgatccggcggtggccaggtcc
gcgctgcgccgcctcgcgggccagcccgaacccgccgccgggtag

DBGET integrated database retrieval system