Nocardiopsis sp. LDBS0036: UIS43_10585
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Entry
UIS43_10585 CDS
T11195
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb00550
Peptidoglycan biosynthesis
nocb01100
Metabolic pathways
nocb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
UIS43_10585 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
UIS43_10585 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nocb01011
]
UIS43_10585 (mrdA)
Enzymes [BR:
nocb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
UIS43_10585 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nocb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
UIS43_10585 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
XEA87910
LinkDB
All DBs
Position
complement(2522468..2524618)
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AA seq
716 aa
AA seq
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MSPVDDVELPGRRLGRAGLLLAQILVLVLFAALAVRLWYLQIPMWDHYRELAVANHHQQL
LVPATRGQILDTTGRPLVNNSTELVVSADYHEITGMEDGGEKVLTDLSEVLDVPLEELQK
RMRLCGPEVSRPCWPGSPYQPVTLADDVEPSVALQIMESADRFPGISAQAHAVREYPQGE
HGSQMLGYLQPVTQEELEAREDLRTQFTGIDMVGRDGVEAVYDAQLRGTAGKRVLGVNNH
GEVMEVISEAPPEPGMHLVTHVDLGVQKIAEEALAEGMANARPRYKADSGAAIVLDVRTG
GVVAMASLPTYDPAIWRGGIDQETFDEMLSEEAGEPLLSRAVQGTYPPGSTFKVSSLAAA
AENGYSLRSTYACPGSVNLAGQNYENYEGQGQGPISLHEAIVVSCNTVFYNFGYQMWKDD
GGLYPDGEADEAMAEMAKGFGFGSPTGIDLPYETSGRIPDREWKRTFWQETRENNCHRGE
HGYPDVAETDPSRAAYLKLLAYEQCVEGFQWRANEAVNFAIGQGDVLVTPLQLASAYAAV
ANGGTLHEPRIGRALVSADGTEVREIEPVVRGELPVSDGTLEYLQTALTAVPKEGTARGA
FAGFPQDKVSVAGKTGSADVEGRQVSSWFASYAPADDPQFAIVVLVSQGGTGGTTAAPIA
RAIYDGIYGFDSPAQGAEAEVEEDASGGAEPLIPGGAPPEQLPDIRPDGSIDLLDR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccgtcgacgacgtcgaactgcccggccgcagactcggccgggccggtttgctg
ctcgcccagatcctggtcctggtgctcttcgcggccctggccgtacggctgtggtacctc
cagattccgatgtgggaccactaccgcgagctcgcggtggccaaccaccaccagcagctc
ctcgtccccgccacgcgggggcagatcctggacaccaccggccgcccgctggtcaacaac
agcaccgagctggtggtctccgccgactaccacgagatcacgggcatggaggacggcggc
gagaaggtcctgaccgacctgtccgaggtgctcgacgtcccgctggaggaactccagaag
cgcatgcgcctgtgcgggcccgaggtgagccgcccgtgctggcccggctcgccctaccag
cccgtcaccctcgccgacgacgtggagccctccgtcgccctccagatcatggagagcgcc
gaccgcttccccgggatcagcgcccaggcccacgccgtgcgcgagtacccgcagggcgag
cacggctcccagatgctgggctacctgcaaccggtgacccaggaggagctggaggcccgc
gaggatctgcgcacccagttcaccggcatcgacatggtgggccgcgacggcgtggaggcg
gtctacgacgcccagctgcgcggcaccgcgggcaagcgcgtcctgggcgtgaacaaccac
ggcgaggtcatggaggtcatctccgaggcgccgcccgaaccggggatgcacctggtcacc
cacgtcgacctcggcgtgcagaagatcgccgaggaggcgctggccgaggggatggcgaac
gcccggccccgctacaaggccgactccggcgccgccatcgtcctggacgtgcgcaccggc
ggcgtggtggccatggcgagcctgcccacctacgaccccgcgatctggcgcggcggcatc
gaccaggagaccttcgacgagatgctcagcgaggaggcgggcgagccgctgctctcccga
gccgtgcagggcacctacccgccgggctccacgttcaaggtctcctcgctcgcggcggcc
gcggagaacgggtactcgctgcgcagcacctacgcctgcccgggctcggtgaacctggcc
gggcagaactacgagaactacgagggccagggccagggtccgatcagcctccacgaggcc
atcgtggtctcctgcaacaccgtcttctacaacttcggctaccagatgtggaaggacgac
ggcgggctctaccccgacggcgaggcggacgaggcgatggccgagatggccaagggcttc
ggcttcggctccccgaccgggatcgacctgccctacgagacctccgggcgcatccccgac
cgcgagtggaagcgcaccttctggcaggagacccgcgagaacaactgccaccggggcgag
cacggctaccccgacgtcgccgagaccgacccgtcgcgcgccgcctacctcaagctgctg
gcctacgagcagtgcgtggagggcttccagtggcgggccaacgaggccgtcaacttcgcc
atcggccagggggacgtcctcgtcaccccgctccagctcgccagcgcctacgcggccgtc
gccaacggcggcacgctccacgagccgcgcatcggcagggcgctggtctccgccgacggg
acggaggtgcgcgagatcgaaccggtcgtgcgcggcgagctcccggtcagcgacgggacg
ctggagtacctccagaccgcgctcacggcggtccccaaggagggcaccgcccgcggcgcc
ttcgccgggttcccgcaggacaaggtgtccgtcgcgggcaagaccggtagcgccgacgtg
gaggggcgccaggtctcctcctggttcgcctcctacgcgcccgccgacgacccgcagttc
gccatcgtcgtcctggtctcccagggcggtaccggcggtacgaccgcggcgcccatcgcg
cgcgccatctacgacggcatctacgggttcgactccccggcacagggagccgaggccgag
gtcgaagaggatgcgtccggcggcgcggagccgctgatcccgggcggcgcgccgcccgag
caactgcccgacatccgtcccgacggttccatcgacctgctggatcggtag
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