Nocardiopsis sp. LDBS0036: UIS43_12770
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Entry
UIS43_12770 CDS
T11195
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nocb03000
]
UIS43_12770
Transcription factors [BR:
nocb03000
]
Prokaryotic type
Helix-turn-helix
GntR family
UIS43_12770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_Crp_2
DUF977
HTH_24
DUF6401
HTH_28
Sigma70_r4
AbiEi_4
HTH_41
RepL
Motif
Other DBs
NCBI-ProteinID:
XEA88313
LinkDB
All DBs
Position
complement(3059937..3060719)
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AA seq
260 aa
AA seq
DB search
MTRVSIPGIPQDSGAPVRAGVPEHGRVPKYYAVRIQLTELVSGLVVGQPLPTERELAERF
GAARETVRQALRDLLLEGRLSRRGRGTVVAGPKLEQPLSLASYTEGVRRQGRRPGRSLID
LRSWPCPPRLAEELHLSPGEPVWHLERVLLADDERVGLESTYIAVARVPRLDVDFDPDST
FYGYLADRVGITFGDADERLETVLATPREALLIGTPPALPMLLIHRVSRDEKGGPFERVR
SLYRGDRFSFSVHLAGDGRE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgtgtcgatcccaggaatcccccaggacagcggcgcccccgtgcgcgcgggc
gtccccgagcacgggcgcgtccccaagtactacgcggtccggatacagctcaccgagctg
gtgtccgggctggtggtgggccagccgctgcccaccgaacgcgagctggccgagcgcttc
ggcgcggcccgcgagacggtccgccaggcgctgcgcgacctcctgctggagggcaggctc
agccgccgcgggcgcggcacggtggtggccggccccaagctggagcagcccctgtccctg
gccagctacaccgagggcgtgcgccgccaggggcggcggccgggccgctccctcatcgac
ctgcgcagctggccgtgcccgccccggctggccgaggagctgcacctgagcccgggcgag
ccggtctggcacctggagcgggtgctgctggccgacgacgagcgggtggggctggagtcc
acctacatcgcggtggcgcgcgtgccccgcctggacgtggacttcgacccggactccacc
ttctacggctacctcgccgacagggtcggcatcacgttcggcgacgccgacgagcgcctg
gagaccgtgctggccaccccgcgcgaggccctgctcatcggtacccctccggcgctgccg
atgctgctcatccaccgcgtctcccgggacgagaagggcggccccttcgaacgggtgcgc
tcgctctaccggggcgaccggttcagcttcagcgtccacctggccggggacgggcgcgag
tag
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