Nocardiopsis sp. LDBS0036: UIS43_13945
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Entry
UIS43_13945 CDS
T11195
Name
(GenBank) sugar ABC transporter ATP-binding protein
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
UIS43_13945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nocb02000
]
UIS43_13945
Transporters [BR:
nocb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
UIS43_13945
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_30
SMC_N
AAA_29
XdhC_CoxI
AAA_23
AAA_16
RsgA_GTPase
AAA_15
AAA_27
AAA_25
AAA_22
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
XEA83380
LinkDB
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Position
3329465..3331084
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AA seq
539 aa
AA seq
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MSGPPLLRMSGITKSFLGVRVLHGIDLELHPGELHALVGENGAGKSTLMKVLAGVHRADG
GTVELEGGTVSFEHPVQAQRAGVTTVFQEFNLLPDRTVAENVFLGREIRRRGLVDARAME
RATAELLAELGLEGIDPRARVRSLSVAEQQIVEIVKALSHDARIISMDEPTAALADHEVE
VLYRIIGRLRERGVAVLYVSHRMREIFDLADTITVLKDGHLVDTVPAGEIGPAELVRKMV
GRPVSAVFPEPLEPHGEHVGRVRLSVTGGGNTQLDGIGFEVRGGEILGLGGLQGSGRTEV
AHALFGVERFTRGEVRVDGRRVDPRSPRTAVRAGLVLVTEDRKAQGLALNQSVAANGRLV
LDAVWPLGSARGARRLPGILSSLELVARGGQDQEVRYLSGGNQQKVVLAKWLAAEPGVMV
LDEPTRGIDVGAKQAVYRLMRELAAAGVAIVLISSELPELIGMSDRLVVLRDGRVAGELP
GGAAEEAVMAMATGSPHPGGSAAPVPGQDPAAAPPAAGGDPAAGTDNGGSPARHEEAAP
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcccgcccctgctccggatgagcggcatcaccaagtccttcctgggcgtgcgc
gtcctgcacgggatcgacctggaactccaccccggcgagctgcacgccctggtcggcgag
aacggggcgggcaagtccaccctgatgaaggtgctggccggggtgcaccgcgcggacggg
ggcacggtcgagctggagggcggcaccgtctccttcgagcaccccgtccaggcccagcgc
gcgggcgtgaccacggtcttccaggagttcaacctcctgcccgaccgcaccgtcgccgag
aacgtcttcctcggccgcgagatccgccgccgcggcctggtggacgcccgggccatggag
cgggccaccgccgaactgctcgccgaactcggcctggagggcatcgacccccgggcccgg
gtgcggtcgctgtcggtggccgaacagcagatcgtggagatcgtcaaggcgctctcgcac
gacgcgcgcatcatctccatggacgagccgaccgccgcgctggccgaccacgaggtggag
gtgctctaccggatcatcggccgcctgcgcgaacgcggcgtggcggtgctgtacgtgtcg
caccgcatgcgggagatcttcgacttggccgacaccatcacggtgctcaaggacggccat
ctcgtggacaccgtccccgccggtgagatcggtccggccgagctggtccgcaagatggtc
gggcgtccggtctcggcggtcttccccgagcccctggagccgcacggcgagcacgtggga
cgggtgcggctgtcggtcaccggaggcggcaacacccagctggacgggatcggcttcgag
gtgcgcggcggcgagatcctgggcctgggcgggctccagggcagcgggcgcaccgaggtc
gcccacgccctcttcggcgtcgagcgcttcacccggggcgaggtccgcgtggacgggcgg
cgggtggacccgcgctcgccgcgcacggcggtgcgggcgggcctggtgctggtcaccgag
gaccgcaaggcgcaggggctggcgctgaaccagtcggtggcggccaacggccgcctggtc
ctggacgcggtctggcccctgggctcggcgcgcggggcccggcggctgcccggcatcctc
tcctccctggagctggtggcgcgcggcggccaggaccaggaggtccggtacctgtccggc
ggcaaccagcagaaggtcgtgctggccaagtggctggccgccgaacccggcgtgatggtg
ctcgacgagcccacgcgcggcatcgacgtgggcgccaagcaggccgtctaccggctcatg
cgcgagctggccgcggccggtgtggcgatcgtgctcatctcctccgagctgcccgagctg
atcggcatgtccgaccggctggtcgtcctgcgggacggccgggtggcgggcgagctgccc
ggcggggccgccgaggaggcggtcatggcgatggccaccggatcgccgcacccgggcggg
tccgccgcaccggttcccgggcaggacccggccgccgctccaccggccgccgggggcgac
ccggccgccggaaccgacaacggcggctcccccgcacggcacgaggaggccgccccgtga
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