Nocardiopsis sp. LDBS0036: UIS43_14660
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Entry
UIS43_14660 CDS
T11195
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UIS43_14660 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nocb03019
]
UIS43_14660 (groL)
03110 Chaperones and folding catalysts [BR:
nocb03110
]
UIS43_14660 (groL)
03029 Mitochondrial biogenesis [BR:
nocb03029
]
UIS43_14660 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nocb04147
]
UIS43_14660 (groL)
Enzymes [BR:
nocb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
UIS43_14660 (groL)
Messenger RNA biogenesis [BR:
nocb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
UIS43_14660 (groL)
Chaperones and folding catalysts [BR:
nocb03110
]
Heat shock proteins
HSP60 / Chaperonin
UIS43_14660 (groL)
Mitochondrial biogenesis [BR:
nocb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
UIS43_14660 (groL)
Exosome [BR:
nocb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
UIS43_14660 (groL)
Exosomal proteins of other body fluids (saliva and urine)
UIS43_14660 (groL)
Exosomal proteins of breast cancer cells
UIS43_14660 (groL)
Exosomal proteins of colorectal cancer cells
UIS43_14660 (groL)
Exosomal proteins of bladder cancer cells
UIS43_14660 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AIM3_BBC1_C
Motif
Other DBs
NCBI-ProteinID:
XEA83514
LinkDB
All DBs
Position
complement(3496346..3497977)
Genome browser
AA seq
543 aa
AA seq
DB search
MAAKLIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEI
ELEDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPISLKRGI
ESAVARINEELGNLSKDIETKEQIASTASISAGDPQIGETIAEAMDKVGKEGVITVEEGQ
TFGLELELAEGMRFDKGYISPYFATDLERMETVLEDPYILIVNSKISNNNEFLPVVEKVL
QAGRPLVVIAEDLEGGALQTLVVNKIRGTFKSVAVKAPGFGDRRKAQLGDIAVLTGGQVI
TEEVGLKLESTELDMLGRARKVVVTKDETTIVDGAGDATAIAGRVNEIRNEIERTDSDYD
REKLQERLARLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGILPGGGVALLQ
ASVPAFEKLELEGDEAIGADIVRRAIAEPLKQIAINAGLEGGVVAEKVKNLEPGFGLNAA
TGEYTDLFKDGVIDPTKVTRSALQNAASIAGLFLTTEAVIAEKPEKAAAPAGDPTGGMGG
MDF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaactgatcgcgttcgacgaggaggcccgtcgcggccttgagcgcggcatg
aaccagctcgctgacgccgtcaaggtcacgctcggccccaagggccgcaacgtcgtcctg
gagaagaagtggggcgcccccacgatcaccaacgacggtgtctccatcgccaaggagatc
gagctcgaggacccgtgggagaagatcggggccgagctggtcaaggaggtcgccaagaag
accgacgacgtcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggcgctcgtt
cgcgagggcctgcgcaacgtcgccgccggcgccaacccgatcagcctcaagcgcggcatc
gagtccgccgtcgcgcgcatcaacgaggagctcggcaacctctccaaggacatcgagacc
aaggagcagatcgcctccaccgcctcgatctccgccggcgacccccagatcggcgagacc
atcgccgaggccatggacaaggtcggcaaggaaggcgtcatcacggtcgaggagggccag
accttcgggctggagctcgagctcgccgagggcatgcgcttcgacaagggctacatctcg
ccctacttcgccaccgacctggagcgcatggagacggtcctcgaggacccctacatcctc
atcgtcaactccaagatctcgaacaacaacgagttcctgccggttgtcgagaaggtcctc
caggccggccgcccgctggtcgtcatcgccgaggacctggagggcggcgccctccagacg
ctggtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttc
ggcgaccgccgcaaggcccagctcggcgacatcgccgtgctgaccggcggccaggtcatc
accgaggaggtcggcctcaagctggagagcaccgagctcgacatgctcggccgcgcccgc
aaggtcgtcgtcaccaaggacgagaccaccatcgtggacggcgccggtgacgccaccgcg
atcgccggtcgcgtgaacgagatccgcaacgagatcgagcgcaccgactccgactacgac
cgcgagaagctccaggagcgtctcgcccgcctggccggcggcgtggccgtcatcaaggcc
ggtgccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtccgc
aacgccaaggccgcggtcgaggagggcatcctgcccggcggtggtgtcgctctgctccag
gccagcgtcccggccttcgagaagctggagctggagggcgacgaggccatcggcgccgac
atcgtgcgccgcgccatcgccgagccgctcaagcagatcgcgatcaacgccggcctcgag
ggcggcgtcgtggcggagaaggtcaagaacctggagcccgggttcggcctgaacgccgcc
accggcgagtacaccgacctgttcaaggacggcgtcatcgacccgaccaaggtcacccgc
tcggctctgcagaacgcggcttccatcgccggtctgttcctgaccaccgaggccgtcatc
gccgagaagccggagaaggccgccgctcccgccggcgacccgaccggtggcatgggcggc
atggacttctag
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