Nocardiopsis sp. LDBS0036: UIS43_15310
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Entry
UIS43_15310 CDS
T11195
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocb03400
]
UIS43_15310
Enzymes [BR:
nocb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
UIS43_15310
DNA repair and recombination proteins [BR:
nocb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
UIS43_15310
Prokaryotic type
UIS43_15310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
XEA83638
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All DBs
Position
complement(3646802..3648109)
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AA seq
435 aa
AA seq
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MASATIVLFTQDLRVHDHPALAAAVERPGPTLPVFVLDPAVAGRSARNRAALLAEALADL
RAALRERGADLVLLRGDTVREVAALARASGADTVHVTDGVSSLAARRARRLRATGLTVRA
FPGLTVVPPGEVTPAGGDHYKVFTPYWKAWEAAAWRDPAAPPDRVVLPEGVRPGELPGRG
TDGLGALAEDLPRGGERAARERLDAWLSSGLAAYPDRHDDLPGAATSHLSADLRLGCLSP
LEAALAASPLPGGGAFVRQLAWRDFHHQVTAAFPAVNVRDYRPRDRKWREDPDALDAWKR
GRTGVPVVDAGMRQLLREGFVHNRARMITAAFLTRTLRVHWREGADHFHAHLVDGDVANN
YGNWQWVAGTGNDTRPNRAFNPLRQARRFDPEGVYVRRYLPELADLPGGRAHTPWREEHP
PPGYPAPIADPGHWG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttggcgtccgccaccatcgtcctgttcacacaggacctccgcgtccacgaccaccccgcc
ctggccgccgcggtcgagcgccccggcccgaccctgccggtcttcgtgctggaccccgcg
gtggccggccggtccgcccgcaaccgagccgccctgctcgccgaagccctcgccgacctg
agggccgcactgcgcgagcgcggcgccgacctggtcctcctccggggcgacaccgtccgt
gaggtcgccgccctggcccgggccagcggggccgacaccgtccacgtcaccgacggcgtc
agctccctcgccgcgcgacgcgcgcgacgcctgcgcgcgaccggcctgaccgtgcgggcc
ttcccggggctcaccgtggtcccgccgggggaggtcaccccggcgggcggcgaccactac
aaggtgttcacgccctactggaaggcctgggaggccgccgcgtggcgcgatccggccgcg
ccgccggaccgtgtggtcctgcccgagggggtccggcccggcgagctgcccggacgcggg
acggacggtctgggcgcgctcgccgaggacctgccgcggggaggggagcgcgcggcccgc
gagcgcctggacgcctggctgtcgtccgggctggcggcctaccccgaccggcacgacgac
ctgccgggcgcggccacctctcacctgtccgccgacctgcgcctgggctgcctgtcaccg
ctggaggccgccctggccgcctcacccctgcccgggggaggggcgttcgtccgccagctc
gcctggcgcgacttccaccaccaggtcaccgctgccttcccggcggtgaacgtccgcgac
taccggccccgggacaggaaatggcgcgaggaccccgacgccctcgacgcctggaagcgg
gggcggaccggcgttccggtcgtggacgcaggaatgcgccagctgctgcgcgaggggttc
gtgcacaaccgggcgcgcatgatcaccgcggcgttcctcacccggaccctgcgcgtgcac
tggcgcgagggcgccgaccacttccacgcccacctcgtggacggggacgtggccaacaac
tacggcaactggcagtgggtcgcgggcacgggcaacgacacccggcccaacagggcgttc
aacccgctgcgccaggcccgcaggttcgaccccgagggcgtgtacgtccgccgctacctg
cccgaactggccgatctcccgggcgggcgcgcacacacgccctggcgggaggagcacccg
ccccccggttacccggcaccgatcgccgaccccggccactggggctga
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