Nocardiopsis sp. LDBS0036: UIS43_20140
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Entry
UIS43_20140 CDS
T11195
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
UIS43_20140
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
DUF7194
Motif
Other DBs
NCBI-ProteinID:
XEA84527
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Position
complement(4739235..4740467)
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AA seq
410 aa
AA seq
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MTNKSVKRAFRYRFYPTDAQAAELSRTFGCVRLVYNRALAERSTAWHQHQERVGYSHTST
MLTAWKRTEELSFLTEVSCVPLQQTLRHLHTAFRNFFDRRARYPRFKSKKKSRASAEYTR
SGFRYRDGHLTLAKMSEALDIVWSRPLPEGARPSTVTVSRDAAGRWFVSLLCQDTITSAP
AVNNAVGVDAGITSVVTLSTGEKVANPRHEQRDRARLARAQRALARKAKGSANRDKARRK
VARVHARITDRRRDFLHKLTSRLVRENQVVVIEDLTVRNLVKNRRLARAISDAAWRELRT
MLEYKCAWYGRDLVVVDRFFPSSKTCSTPGCGYVHASLPLNVREWTCPGCGITHDRDVNA
ANNLEAAGLAVVACGAGVRPQRESSRTGRPATKQEGHGATRDEALASNHR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaagagcgtgaagcgggcgtttcggtaccgcttctacccgaccgatgcgcag
gcggccgagctgtcgcgcacgttcgggtgcgtgcgcctggtctacaaccgcgctctggcc
gaacgcagcaccgcctggcaccagcaccaggaacgcgtgggctactcccacacctcgacc
atgctcaccgcatggaagaggaccgaggagctgtccttcctcaccgaggtctcctgcgtc
ccgctgcaacagacgctgcgccacctgcacaccgccttccggaacttcttcgaccgtcgc
gcgcggtatccgcggttcaagtccaagaagaagtcgcgtgcctcggcggagtacacccgg
tccgggttccgctaccgcgacggccacctgaccctggccaaaatgagcgaagccctggac
atcgtctggtcgcggcccctgcccgaaggggcacggccgtccacggtgacggtctcgcgg
gacgcggccggacgctggttcgtctcgctcctgtgccaggacaccatcacgtcggccccg
gccgtcaacaacgcggtcggcgtcgacgccggaatcacctccgtggtgacgttgtcgacc
ggggaaaaagtagccaacccccgccacgagcaacgcgaccgcgccaggctggcccgcgcc
cagcgggcgctggcccgcaaggccaagggcagcgcgaaccgggacaaggcccgccggaag
gtggcgcgggtgcacgcccgcatcaccgaccgcaggcgcgacttcctgcacaagctcacc
tcccgactcgtccgcgagaaccaagtggtcgtgatcgaggacctgacggtgcgcaacctg
gtcaagaaccgcaggctcgcccgggcgatctcggatgcggcctggcgtgagctgcgcacc
atgttggagtacaagtgcgcctggtacggacgcgacctggtcgtggtggaccgcttcttc
ccctcctccaagacgtgctcgacccccggatgcgggtacgtgcacgcgtcgctgccgttg
aacgtgcgggagtggacgtgccccgggtgcgggatcactcatgaccgtgatgtgaatgcg
gcgaacaatctcgaagccgccgggctggcggttgttgcctgcggagctggtgtgagacct
caacgggagtcctcccggacggggcgaccggcgacgaaacaggaaggccacggggcgacc
cgtgacgaggcattggcctcgaaccaccggtag
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