Nocardiopsis sp. LDBS0036: UIS43_20600
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Entry
UIS43_20600 CDS
T11195
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocb03400
]
UIS43_20600 (radA)
DNA repair and recombination proteins [BR:
nocb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UIS43_20600 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DUF7125
Zn_ribbon_LapB
DnaB_C
AAA_22
ChlI
AAA_16
Lon_C
Rad51
TniB
RecA_N
AAA_30
AAA
GvpD_P-loop
AAA_5
ABC_tran
nSTAND3
NTPase_1
AAA_14
AAA_29
MMR_HSR1
nSTAND_NTPase5
NACHT
RsgA_GTPase
DAP3
AAA_19
AAA_18
MCM
AAA_24
Motif
Other DBs
NCBI-ProteinID:
XEA84610
LinkDB
All DBs
Position
complement(4840042..4841424)
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AA seq
460 aa
AA seq
DB search
MAKAAKTTFRCAECGWSTLKWVGRCGECQAWGTVEEAGAPAPSAVAPAPVTSRARPITEI
SVESAEAVPTGVDELDRVLGGGAVPGGVVLLAGEPGVGKSTLLLEVAAMRAAEGPVLYVT
GEESAGQVRLRAERLGALSDKLYLAAETSIAALASHVDAVGPRLLIVDSVQTMVSPDASG
VPGGVTQIRQVTGALIQIAKERGIATVLVGHVTKDGSIAGPRMLEHLVDVVLHFEGERHS
QLRLLRAVKNRYGPTDEIGCFELTESGIVGLPDPSGLFLTERTDPVPGTCVTVTLEGRRP
LITEVQALVAPTPLPAPRRATSGLDTSRVNMILAVLEKRTGMKLANMDVYASTVGGVKLT
EPAVDLALAMAAASSNNDVALPVGFIAIGEVGLAGDVRTVSGVRRRVAEAQRLGFTEAVV
PKHFGDPVPGIRVHEVEELSEALSRVARRSRRARAPRDGD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggcagcgaagaccacgttccggtgcgcggagtgcggatggagcaccctcaag
tgggtgggccgctgcggcgagtgccaggcctggggcacggtcgaggaggcgggcgccccc
gcgccctccgccgtcgcgcccgcgcccgtcacctcccgggcccggcccatcaccgagatc
agcgtggagagcgccgaggccgtccccaccggcgtcgacgagctcgaccgggtcctgggc
ggcggcgcggtcccgggcggcgtggtgctgctcgccggtgagcccggcgtgggcaagtcc
accctcctgctggaggtcgccgcgatgcgcgcggccgagggccccgtgctgtacgtgacc
ggggaggagtcggccgggcaggtgcggctgcgcgccgagcggctcggcgcgctctccgac
aagctctacctggccgccgagacctccatcgccgccctggccagccacgtggacgcggtc
ggcccccggctgctcatcgtggactcggtgcagaccatggtctcccccgacgccagcggc
gtcccgggcggcgtcacccagatccgccaggtgaccggcgcgctgatccagatcgccaag
gagcgggggatcgccaccgtgctcgtcggacacgtcaccaaggacgggtccatcgccggt
ccgcggatgctggagcacctggtggacgtggtgctgcacttcgagggcgagcgccactcc
cagctgcggctgctgcgcgcggtcaagaaccgctacgggcccaccgacgagatcggctgc
ttcgagctgaccgagtccggcatcgtcggcctgcccgacccgagcgggctgttcctcacc
gagcgcaccgacccggtgccgggcacgtgcgtcaccgtcaccctggaggggcggcggccg
ctcatcaccgaggtccaggccctggtcgcgccgaccccgctgcccgcgccgcgccgggcc
acctcgggcctggacacctcgcgggtgaacatgatcctggcggtgctggagaagcgcacg
ggcatgaagctggccaacatggacgtgtacgcctccaccgtgggcggtgtgaagctgacc
gagcccgccgtggacctggcgctggccatggcggcggccagctccaacaacgacgtcgcg
ctgcccgtcggcttcatcgcgatcggcgaggtgggcctggcgggcgacgtgcgcaccgtg
agcggcgtgcggcgccgggtggcggaggcgcagcggctcggcttcaccgaggcggtcgtg
cccaagcacttcggcgacccggtgccgggcatccgcgtccacgaggtggaggagctgagc
gaggccctgagccgggtggcccggcggtcgcggcgggcccgcgccccccgtgacggggac
tga
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