Nocardiopsis sp. LDBS0036: UIS43_22155
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Entry
UIS43_22155 CDS
T11195
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UIS43_22155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocb03400
]
UIS43_22155
Enzymes [BR:
nocb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
UIS43_22155
DNA repair and recombination proteins [BR:
nocb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
UIS43_22155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Spectrin_SYNE1
YebU_pre-PUA_dom
T2SSF
CHASE9
Motif
Other DBs
NCBI-ProteinID:
XEA84896
LinkDB
All DBs
Position
5175454..5175720
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AA seq
88 aa
AA seq
DB search
MAAKGAKTREEGTAEPELSYEESREELNNVVRQLESGGLSLKDSLALWERGEELARVCEQ
WLEGARAKLAAAMDERRGDEPGDGDTPF
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaagggcgccaagacccgtgaagagggcaccgccgagcccgagctcagctac
gaggagagccgggaggagctcaacaacgtcgtccggcagctggagtcgggcggactcagc
ctgaaggactcgctggccctgtgggagcgcggcgaggaactggcccgcgtgtgcgagcag
tggctggagggggcccgcgccaagctggccgccgccatggacgagcggcggggggacgaa
ccgggggacggcgacacgcccttctga
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