Nocardiopsis sp. LDBS0036: UIS43_22645
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Entry
UIS43_22645 CDS
T11195
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nocb03036
]
UIS43_22645 (smc)
Chromosome and associated proteins [BR:
nocb03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
UIS43_22645 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
XEA84987
LinkDB
All DBs
Position
5291718..5295263
Genome browser
AA seq
1181 aa
AA seq
DB search
MYLKNLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK
MEDVIFAGTSTRQALGRAEVSLTIDNTDGALPIDYTEVTIRRTMFRNGGSEYAINGDTCR
LLDIQDLLSDSGIGREMHVIVGQGQLDTVLHAGPEERRALIEEAAGILKHRKRKEKAIRK
LNAMQGNLDRVTDLTAELRRQLKPLGRQAELARRAAVIQADLRDARLRLLADDIVTLTGQ
LAKEEADEKEVLARRGAAEAALTQTQERETELEAQAAEAAPALARALETYHALSRLTERL
DAVRGLANERHRNLASVSDEPVHRRDPEELEMEAEEAAAQEEELLTRLEEAREALEATVI
ERSAAEDALHREEKRLEAANRASAERREGLVRLSARVESLRGRLASNGDEITRLEESARQ
AAERAERAQAEYEMAAEEAAGLDEGDAELDAAQEEAARRLSEADAGINRLRDAERTAEGE
RAALAARKEALELGLAHKDGAGTLLGADLPGMLGSLAALVQVESGQETAVAAAFGTAAGA
VAVSDPDTAVAALDLLRSEDAGRAGIVIAQAVPAVPRGEWPVLPSGVRYALDAVVAPEHL
AGAVTALLDRTALAADAHAARDLVRKVPGVRAVTPEGDVFSAALVHGGSAAAPSLLEVQA
AVDEAAGRLETATEAAGRIAAELEERRRERADLAAEVEELTARRRQGDRRRNESAQRLGK
LGGQARSAEAESERYAAAAAKAAAARGEEAAKLERLEEELAEAEEVAASIEEDAPDPETR
DELAAQASRARATEMERRLSVRTAEERARSIEGRAERLRAQAFEERRAMERAAERRRTRA
AQATIAEAAAEGARLALERITVSLAAAEAERTAAEADKEARDAELRTVRARVRELSVDLE
KLTSSAHSGEVARAERRLRLEQLEVRASEEMGVDVPTLVAEYGPNVPVPPPGDAEEDAVP
LPYVREVQAKRAKAAERQLNQLGKINPLALEEFAALEERHAFLNAQLEDLKKTRRDLMDI
VQEVDARVQEVFSSAYLDVEREFAAIFGRLFPGGEGRLLLTSPEDMLTTGVEVEARPPGK
KVKRLSLLSGGERSLTAVAFLAAIFKARPSPFYVMDEVEAALDDTNLQRLLVIFEELRAA
SQLIVITHQKRTMEAADALYGVTMQGDGISQVISQKLERPA
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctgaagaatctgacgctgcgcggcttcaagtcgttcgcgtcggccaccaccttg
cgtttcgagcccgggatcacctgtgtggtcggtcccaacggctcgggcaagtccaacgtg
gtggacgccctgtcctgggtgatgggggagcagggggccaagtccctgcgcggcggcaag
atggaggacgtcatcttcgcgggcacctccacccgccaggcgctgggccgcgccgaggtc
agcctcaccatcgacaacaccgacggtgcgctgcccatcgactacaccgaggtcaccatc
cggcggaccatgttccgcaacggcggctcggagtacgccatcaacggcgacacctgccgt
ctcctggacatccaggacctgctcagcgactccggcatcggccgtgagatgcacgttatt
gtcggccaggggcagctggacaccgtcctgcacgccggtcccgaggagcgccgcgccctc
atcgaggaggccgcgggcatcctcaagcaccgcaagcgcaaagagaaggcgatccgcaag
ctcaacgcgatgcagggcaacctggaccgggtcaccgacctcaccgcggagctgcgccgc
cagctcaagcccctgggccgccaggcggagctggcccgcagggccgccgtcatccaggcc
gacctgcgcgacgcccgcctgcgcctgctcgccgacgacatcgtcacgctcaccggtcag
ctggccaaggaggaggcggacgagaaggaggtcctcgcccgccgcggggccgccgaggcc
gccctcacccagacccaggagcgcgagaccgagctggaggcgcaggccgccgaggccgcg
cccgccctggcccgcgccctggagacctaccacgcgctgtcgcgcctgaccgagcgcctg
gacgccgtgcgcggcctggccaacgagcgccaccgcaacctggcctccgtctccgacgag
cccgtccaccgccgcgaccccgaggaactggagatggaggccgaggaggccgccgcccag
gaggaggagctgctcacccggctggaggaggcccgcgaggccctggaggccaccgtcatc
gagcgctccgccgccgaggacgccctgcaccgcgaggagaagcggctggaggccgccaac
cgcgcctccgccgagcgcagggagggcctcgtgcggctgtccgcgcgggtggagagcctg
cgcggccgactggcctcgaacggggacgagatcacccggctggaggagtccgcccgccag
gccgccgaacgcgcggagcgggcccaggccgagtacgagatggccgccgaggaggcggcc
ggtctcgacgagggcgacgccgaactcgacgctgcccaggaggaggcggcccgccgcctg
tccgaggccgacgccgggatcaaccggctgcgcgacgccgagcgcaccgccgagggggag
cgggccgcgctcgccgcgcgcaaggaggctctggagctggggctggcgcacaaggacggc
gccggcaccctcctgggcgccgacctgccggggatgctcggcagcctcgccgccctcgtc
caggtcgagtccggtcaggagaccgccgtggccgcggccttcggcacggccgcgggagcg
gtcgcggtcagcgaccccgacaccgccgtggccgcgctcgacctgctccggtccgaggac
gccggccgtgccgggatcgtcatcgcccaggcggtccccgcggtgccccgcggggagtgg
cccgtgctgccctccggggtccgctacgccctcgacgccgtcgtcgcccccgaacacctg
gccggagcggtcaccgccctgctggaccgcaccgcgctggcggccgacgcccacgccgcc
cgcgacctggtccgcaaggtccccggcgtgcgcgccgtcacccccgagggggacgtgttc
tccgccgcgctggtgcacggcggttcggccgccgcgccgagcctgctggaggtccaggcg
gccgtggacgaggcggccgggaggctggagacggccaccgaggccgccggacggatcgcc
gccgagctggaggagcgcaggcgcgagcgcgccgacctggcagccgaggtcgaggagctg
accgcgcgccgccgccagggcgaccgcaggcgcaacgagtccgcgcagcgcttgggcaag
ctgggcgggcaggcccgttccgccgaggccgagtccgagcggtacgcggccgccgccgcc
aaggccgccgccgcgcgcggcgaggaggccgccaagctggagcggctggaggaggagctg
gccgaggccgaggaggtggccgcctccatcgaggaggacgcgcccgaccccgagacccgc
gacgagctcgccgcccaggcctcgcgggcccgcgccacggagatggagcgccgcctgtcg
gtgcgcaccgccgaggagcgcgcccgctcgatcgagggccgcgccgagcggttgcgcgcc
caggccttcgaggagcgccgcgccatggagcgcgccgccgagcgccgacgcacccgcgcc
gcgcaggccaccatcgccgaggccgccgccgagggcgcccgcctggccctggagcggatc
acggtgtccctggccgcggccgaggccgagcgcaccgccgccgaggcggacaaggaggcg
cgcgacgccgagctgcggaccgtgcgcgcccgcgtccgcgagctgtccgtcgacctggag
aagctgaccagttcggcgcacagcggcgaggtggcccgggccgagcgccgcctgcgcctg
gagcagctggaggtcagggcgagcgaggagatgggcgtcgacgtgcccaccctcgtcgcc
gagtacgggccgaacgtgcccgtgccccctccgggcgacgccgaggaggacgcggtcccg
ctgccgtacgtgcgcgaggtgcaggccaagcgggccaaggccgccgagcgccagctcaac
cagctgggcaagatcaacccgctcgcgctggaggagttcgcggcgctggaggagcggcac
gccttcctcaacgcccagctggaggacctcaagaagacccgccgggacctgatggacatc
gtccaggaggtcgacgcccgggtgcaggaggtgttctcctccgcctacctggacgtggag
cgggagttcgcggcgatcttcgggcggctcttccccgggggcgaggggcggctgctgctc
acctcgcccgaggacatgctgaccaccggtgtggaggtggaggcccgtccgcccggcaag
aaggtcaagcgcctgtccctgctctccggcggcgagcgctccctgaccgcggtggccttc
ctggccgcgatcttcaaggcccggccgtccccgttctacgtgatggacgaggtcgaggcg
gccctggacgacaccaacctccagcgcctgctggtgatcttcgaggagctgcgggccgcc
tcgcagctgatcgtgatcacccaccagaagcgcaccatggaggcggccgacgcgctgtac
ggcgtgacgatgcagggtgacggcatctcccaggtgatcagccagaagctggagcgcccc
gcctga
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