Nocardiopsis sp. LDBS0036: UIS43_23710
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Entry
UIS43_23710 CDS
T11195
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb00260
Glycine, serine and threonine metabolism
nocb00460
Cyanoamino acid metabolism
nocb00630
Glyoxylate and dicarboxylate metabolism
nocb00670
One carbon pool by folate
nocb00680
Methane metabolism
nocb01100
Metabolic pathways
nocb01110
Biosynthesis of secondary metabolites
nocb01120
Microbial metabolism in diverse environments
nocb01200
Carbon metabolism
nocb01230
Biosynthesis of amino acids
nocb01240
Biosynthesis of cofactors
nocb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
UIS43_23710 (glyA)
09102 Energy metabolism
00680 Methane metabolism
UIS43_23710 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
UIS43_23710 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
UIS43_23710 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
UIS43_23710 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
UIS43_23710 (glyA)
Enzymes [BR:
nocb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
UIS43_23710 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
B12-binding
SelA
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
XEA85177
LinkDB
All DBs
Position
complement(5537151..5538419)
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AA seq
422 aa
AA seq
DB search
MATDNTLNQTLGELDPEVAAAVDAELARQRDTLEMIASENFAPQAVIEAQGTVLTNKYAE
GYPGRRYYGGCEHVDVVEQLAIDRAKALFGAEHANVQPHSGAQANTAVYFALLKPGDTIL
GLDLAHGGHLTHGMKINYSGKILNAVAYHVRDEDGTVDYDEVEALAEEHRPKMIVAGWSA
YPRQLDFARFRKIADSVGALLMVDMAHFAGLVAAGLHPNPVPHADVVTTTTHKTLGGPRG
GMILAKAELGKKINSAVFPGMQGGPLEHVIAAKAVALKVAAGEEFADRQRRTVSGARLLA
ERLTRPDAAEVGVKVLSGGTDVHLVLVDLVNSELNGQEAEDRLHSIGITVNRNAVPNDPR
PPMVTSGLRIGTPALATRGFGDEDFAEVADVIAEALKPEFDEAALRGRVQALTAKYPLYP
NL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggctactgacaacacgctcaaccagacgctgggcgaactggaccccgaggtggcggcc
gcggtcgacgcggagctggcccgccagcgcgacaccctggagatgatcgcctcggagaac
ttcgccccccaggcggtgatcgaggcccagggcaccgtcctgaccaacaagtacgcggaa
gggtacccgggccgccgctactacggcgggtgcgagcacgtcgacgtcgtcgagcagctc
gccatcgaccgcgccaaggcgctgttcggcgccgagcacgccaacgtgcagccgcactcg
ggcgcgcaggccaacacggccgtgtacttcgcgctgctcaagccgggtgacaccatcctg
ggcctggacctggcccacggcggccacctgacccacggcatgaagatcaactactccggc
aagatcctcaacgcggtggcctaccacgtgcgcgacgaggacggcaccgtcgactacgac
gaggtcgaggcgctcgccgaggagcaccggcccaagatgatcgtcgccgggtggtcggcc
tacccgcgccagctggacttcgcccgcttccgcaagatcgcggactcggtcggcgcgctc
ctgatggtggacatggcgcacttcgccggtctggtcgcggcggggctgcaccccaacccg
gtgccgcacgccgacgtggtcaccacgaccacgcacaagaccctgggcggcccgcgcggc
ggcatgatcctggccaaggccgagctgggcaagaagatcaactccgcggtgttccccggc
atgcagggcgggccgctggagcacgtgatcgcggccaaggcggtggccctcaaggtcgcc
gcgggcgaggagttcgccgaccgccagcgccgcacggtctcgggcgccaggctgctcgcc
gagcggctgacgcggccggacgcggccgaggtcggcgtgaaggtgctctcggggggcacg
gacgtgcacctggtcctggtggacctggtgaactccgagctcaacggccaggaggccgag
gaccgcctgcactcgatcgggatcacggtcaaccgcaacgcggtgcccaacgacccgcgc
ccgccgatggtcacctccggtctgcggatcggcaccccggcgctggccacccgcggtttc
ggcgacgaggacttcgccgaggtcgcggacgtcatcgccgaggcgctcaagccggagttc
gacgaggccgcgctgcgcggccgggtccaggcgctgaccgcgaagtacccgctctacccg
aacctgtag
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