KEGG   Nocardiopsis sp. LDBS0036: UIS43_25110
Entry
UIS43_25110       CDS       T11195                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
nocb  Nocardiopsis sp. LDBS0036
Pathway
nocb00300  Lysine biosynthesis
nocb00470  D-Amino acid metabolism
nocb01100  Metabolic pathways
nocb01110  Biosynthesis of secondary metabolites
nocb01120  Microbial metabolism in diverse environments
nocb01230  Biosynthesis of amino acids
Module
nocb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:nocb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    UIS43_25110 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    UIS43_25110 (dapF)
Enzymes [BR:nocb01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     UIS43_25110 (dapF)
SSDB
Motif
Pfam: DAP_epimerase FeoA Bacteriocin_II
Other DBs
NCBI-ProteinID: XEA85441
LinkDB
Position
5905981..5906805
AA seq 274 aa
MVGMRFAKGHGTENDFVILPDPDGELDLTEEAVRLLCDRRAGIGADGVLRVVRTRALGEA
LAPAARTAERSEWFMDYRNADGSVAEMCGNGVRVFARYLLHAGLVEGDRFEVGTRDGAKE
VQVEADGGITIDMGRVEMQGTSSAKLARQVVHGEQISVGNPHLACEVTVPVAEVDLGELP
VLDVEAFPAGANVEVYREVAPGVLEMRVYERGSGETRSCGTGIVAAAAAATPRGEGATWR
VRVPGGECTVFLDADGARLSGPAVIVAEGETNLI
NT seq 825 nt   +upstreamnt  +downstreamnt
atggtcggcatgcgattcgccaagggccacggaacagagaacgacttcgtgatcctcccc
gaccccgacggggagctcgacctcacggaggaggccgtccgcctgctgtgcgaccgccgg
gccgggatcggcgcggacggcgtcctgcgggtggtgcgcacgcgcgccctcggcgaggcc
ctcgccccggccgcccgcacggccgagcgctccgagtggttcatggactaccgcaacgcc
gacgggagcgtcgccgagatgtgcggcaacggtgtgcgggtcttcgcccgctacctgctg
cacgccgggctcgtcgagggcgaccgcttcgaggtgggcacccgtgacggagccaaggag
gtccaggtggaggccgacggcggcatcaccatagacatgggccgggtggagatgcagggg
acctcctccgccaagctcgcccggcaggtggtgcacggtgagcagatctccgtgggcaac
ccgcacctggcctgcgaggtgaccgtgccggtcgccgaggtggacctgggcgagctgccg
gtgctggacgtggaggccttccccgccggggcgaacgtggaggtgtaccgcgaggtggct
ccgggtgtgctggagatgcgcgtgtacgagcgcggttccggggagacccgctcctgcggg
accgggatcgtcgccgccgctgccgcagccacgccccgcggggagggcgcgacctggagg
gtgcgggtcccggggggcgagtgcaccgtcttcctggacgcggacggcgcgaggctgagc
ggcccggccgtcatcgtggccgagggcgagacgaacctgatctga

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