Nocardiopsis sp. LDBS0036: UIS43_25110
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Entry
UIS43_25110 CDS
T11195
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb00300
Lysine biosynthesis
nocb00470
D-Amino acid metabolism
nocb01100
Metabolic pathways
nocb01110
Biosynthesis of secondary metabolites
nocb01120
Microbial metabolism in diverse environments
nocb01230
Biosynthesis of amino acids
Module
nocb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
UIS43_25110 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
UIS43_25110 (dapF)
Enzymes [BR:
nocb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
UIS43_25110 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
FeoA
Bacteriocin_II
Motif
Other DBs
NCBI-ProteinID:
XEA85441
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Position
5905981..5906805
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AA seq
274 aa
AA seq
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MVGMRFAKGHGTENDFVILPDPDGELDLTEEAVRLLCDRRAGIGADGVLRVVRTRALGEA
LAPAARTAERSEWFMDYRNADGSVAEMCGNGVRVFARYLLHAGLVEGDRFEVGTRDGAKE
VQVEADGGITIDMGRVEMQGTSSAKLARQVVHGEQISVGNPHLACEVTVPVAEVDLGELP
VLDVEAFPAGANVEVYREVAPGVLEMRVYERGSGETRSCGTGIVAAAAAATPRGEGATWR
VRVPGGECTVFLDADGARLSGPAVIVAEGETNLI
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcatgcgattcgccaagggccacggaacagagaacgacttcgtgatcctcccc
gaccccgacggggagctcgacctcacggaggaggccgtccgcctgctgtgcgaccgccgg
gccgggatcggcgcggacggcgtcctgcgggtggtgcgcacgcgcgccctcggcgaggcc
ctcgccccggccgcccgcacggccgagcgctccgagtggttcatggactaccgcaacgcc
gacgggagcgtcgccgagatgtgcggcaacggtgtgcgggtcttcgcccgctacctgctg
cacgccgggctcgtcgagggcgaccgcttcgaggtgggcacccgtgacggagccaaggag
gtccaggtggaggccgacggcggcatcaccatagacatgggccgggtggagatgcagggg
acctcctccgccaagctcgcccggcaggtggtgcacggtgagcagatctccgtgggcaac
ccgcacctggcctgcgaggtgaccgtgccggtcgccgaggtggacctgggcgagctgccg
gtgctggacgtggaggccttccccgccggggcgaacgtggaggtgtaccgcgaggtggct
ccgggtgtgctggagatgcgcgtgtacgagcgcggttccggggagacccgctcctgcggg
accgggatcgtcgccgccgctgccgcagccacgccccgcggggagggcgcgacctggagg
gtgcgggtcccggggggcgagtgcaccgtcttcctggacgcggacggcgcgaggctgagc
ggcccggccgtcatcgtggccgagggcgagacgaacctgatctga
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