Nocardiopsis sp. LDBS0036: UIS43_25155
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Entry
UIS43_25155 CDS
T11195
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb03030
DNA replication
nocb03430
Mismatch repair
nocb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UIS43_25155 (holA)
03430 Mismatch repair
UIS43_25155 (holA)
03440 Homologous recombination
UIS43_25155 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocb03032
]
UIS43_25155 (holA)
03400 DNA repair and recombination proteins [BR:
nocb03400
]
UIS43_25155 (holA)
Enzymes [BR:
nocb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UIS43_25155 (holA)
DNA replication proteins [BR:
nocb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UIS43_25155 (holA)
DNA repair and recombination proteins [BR:
nocb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UIS43_25155 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
XEA85450
LinkDB
All DBs
Position
complement(5918085..5919047)
Genome browser
AA seq
320 aa
AA seq
DB search
MPAPALLTIIVGDEELLVDRAVASVVAAVREADPGVDVHDLVPAQVGMSTLVEVTSPSLF
GDRRVVVLRSSQDLTKDLAATVTDYLGDPADDVNLVLTHAGGNKGKALLQAAVKAGAHRV
DCKGPSKPAERVAFVKGEFSQAGRQITADAAQALVDAVGSELREIAAACTQLIADTEGRV
DAAAVARYHSGRAEASGFTVADRAVEGRLPEALEQLRWSLAVGTAPVLINSALAGAVRGI
AVAAQPPRGMSEADLAKRAKVPPWKLRTLRQQARGWSPAGVTRAMAVVAETDALIKGAGR
DPEYALERAVIEIARARGTR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacccgccctgctcacgatcatcgtcggggacgaggaactcctcgtcgaccgt
gccgtcgcctccgtcgtcgcggcggtccgcgaggccgatcccggcgtggacgtccacgac
ctggtgcccgcccaggtggggatgtccacactcgtcgaggtgacctcgccctcgctgttc
ggcgaccggcgggtggtggtactgcgctcgtcccaggacctgaccaaggacctggcggcg
accgtcaccgactacctcggggaccctgccgacgacgtcaacctcgtgctcacccacgcg
ggcggcaacaagggcaaggcactgctccaggccgcggtcaaggcgggcgcccaccgtgtg
gactgcaaggggccgagcaagcccgccgaacgggtggccttcgtcaagggcgagttctcc
caggcggggcgccagatcaccgccgacgccgcgcaggcgctggtggacgcggtcggcagt
gagctgcgcgagatcgcggcggcctgcacccagctgatcgccgacaccgagggccgggtg
gacgccgcggcggtggccaggtaccactccggcagggcggaggcctcggggttcaccgtg
gccgaccgcgccgtggaggggcgcctgcccgaggcgctggagcagttgcgctggtcgctg
gcggtgggtaccgccccggtgctcatcaacagcgcgctggccggtgcggtgcgcggcata
gccgtggccgcccagccgccgcgcggcatgtccgaggcggatctggccaagcgcgccaag
gtcccgccgtggaagctgcggaccctgcgtcagcaggcgcgggggtggagcccggcgggg
gtcacccgggccatggcggtggtcgccgagaccgacgccctcatcaagggcgccggacgc
gaccccgagtacgcgctggagcgggccgtcatcgagatcgcccgggcccgcggcacgcgt
tag
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