Nocardiopsis sp. LDBS0036: UIS43_26400
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Entry
UIS43_26400 CDS
T11195
Name
(GenBank) carbohydrate-binding module family 20 domain-containing protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb00500
Starch and sucrose metabolism
nocb01100
Metabolic pathways
nocb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
UIS43_26400
Enzymes [BR:
nocb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
UIS43_26400
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_20
Alpha-amylase
Alpha-amylase_C
Motif
Other DBs
NCBI-ProteinID:
XEA85669
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All DBs
Position
6216054..6217898
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AA seq
614 aa
AA seq
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MKPIRPGAAAGAVLMGIGLLAAPAQAAPVPAAPTPTTPVPAAPAPAEDVRAADNGETIVQ
LFQWNWDSVATECEEFLGPHGFGGVQVSPPQEHVVIPFAEGGDYPWWQDYQPTSYRIDNT
RRGTAEEFQAMVSTCADNGVRIYADAIINHMTGDGSGTGSAGTEWAKYEYPDLFGDGTAS
RTGEDFSSCRREISNWNDKWEVQNCELVGLSDLDTGDPEVRAQIRRYLNGLVDMGVGGFR
VDASKHVPEAHVDAIFSDLNEVPVFGGQPDVFHEVYGDQTIPYTAYTPYGRVTAFDYQRD
ISNKFAGGDISGLAQLPDYGGLTDEQATVFVDNHDTQRYHPTLTFKDGDRYHLAVAFMLA
HPYGRPVVMSSYDFGSNVTQGPPSVGEAAGNPAGWITADTDCASAEWVCEHRHPTVAGMA
AFRNATGDTPVVQRATDGSSRLAFDRGDRGFAAFNATGGTWNLTADTGLPDGSYDNAAGS
GTLTVADGRISARVPANGAVALHVGGTCDDPAECGGGGPGEPGEPGEVNVSATVETWYGQ
EVYVVGSTPGLGSWNPPSGVKLSTDASTYPVWSGTAPIGADTEWKLVKIDGAGNVEWESG
ANRVGPAASVTWRD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccatccgacccggcgccgccgccggggcggtcctgatggggatcggcctgctg
gccgcccccgcgcaggccgcccccgtcccggcggccccgaccccgacgacaccggtcccg
gcagcccccgcccccgccgaggacgtccgggccgccgacaacggcgagaccatcgtccag
ctcttccagtggaactgggactccgtcgccaccgagtgcgaggagttcctcggcccccac
ggcttcggcggggtgcaggtctccccgccccaggagcacgtggtcatccccttcgccgag
ggcggcgactacccctggtggcaggactaccagccgacctcctaccgcatcgacaacacc
cggcgcggcaccgccgaggagttccaggcgatggtctccacctgtgccgacaacggcgtg
aggatctacgccgacgcgatcatcaaccacatgaccggcgacggctcgggcaccggcagc
gcgggcacggagtgggccaagtacgagtaccccgacctgttcggcgacggcaccgcctcc
cgcacgggggaggacttcagctcctgccggagggagatcagcaactggaacgacaagtgg
gaggtgcagaactgcgagctggtcggcctgtccgacctcgacacgggtgaccccgaggtg
cgcgcgcagatccgccgctacctcaacggcctggtggacatgggcgtggggggcttccgc
gtggacgcctccaagcacgtccccgaggcccacgtcgacgcgatcttctccgacctgaac
gaggtcccggtcttcggcggtcagcccgacgtcttccacgaggtctacggggaccagacc
atcccctacaccgcctacacgccctacggccgcgtgaccgccttcgactaccagcgcgac
atctccaacaagttcgccggaggcgacatctccggcctggcccagctgccggactacggc
gggctcaccgacgagcaggccaccgtcttcgtcgacaaccacgacacccagcgctaccac
ccgaccctgaccttcaaggacggcgaccgctaccacctggccgtggcgttcatgctggcc
cacccctacgggcgccccgtggtgatgtccagctacgacttcggctccaacgtcacccag
ggcccgcccagcgtcggcgaggcggcgggcaacccggcgggctggatcaccgccgacacc
gactgcgccagcgccgagtgggtctgcgagcaccgccacccgaccgtcgccgggatggcc
gccttccgcaacgccaccggcgacacccccgtcgtccagcgcgccaccgacggctcctcc
cggctcgccttcgaccggggcgaccgcggcttcgccgccttcaacgcgaccggcggcacc
tggaacctgaccgccgacaccggcctgcccgacggcagctacgacaacgccgccgggagc
gggaccctcaccgtcgccgacggccggatcagcgcccgggtccccgcgaacggggccgtc
gccctgcacgtgggcggcacctgcgacgacccggccgagtgcgggggcggcggccccggt
gagccgggcgagccgggcgaggtcaacgtctccgccaccgtggagacctggtacggccag
gaggtgtacgtggtcggctccacccccgggctggggtcctggaaccccccgagcggggtg
aagctgtccaccgacgcgtccacctaccccgtgtggtcgggcaccgcccccatcggcgcc
gacaccgagtggaagctggtcaagatcgacggcgcgggcaacgtcgagtgggagtccggc
gccaaccgcgtcggccccgccgccagcgtcacctggcgcgactga
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