Candidatus Nanohalococcus occultus: SVXNc_0154
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Entry
SVXNc_0154 CDS
T10160
Symbol
glyA
Name
(GenBank) Glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nocc Candidatus Nanohalococcus occultus
Pathway
nocc00260
Glycine, serine and threonine metabolism
nocc00630
Glyoxylate and dicarboxylate metabolism
nocc00670
One carbon pool by folate
nocc00680
Methane metabolism
nocc01100
Metabolic pathways
nocc01110
Biosynthesis of secondary metabolites
nocc01120
Microbial metabolism in diverse environments
nocc01200
Carbon metabolism
nocc01230
Biosynthesis of amino acids
nocc01240
Biosynthesis of cofactors
nocc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nocc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SVXNc_0154 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SVXNc_0154 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SVXNc_0154 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SVXNc_0154 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SVXNc_0154 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SVXNc_0154 (glyA)
Enzymes [BR:
nocc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SVXNc_0154 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
B12-binding
Usp
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-ProteinID:
WEL19186
LinkDB
All DBs
Position
complement(137713..138975)
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AA seq
420 aa
AA seq
DB search
MEHRDLEDADPEVYQALNDEIERQESESLEMIASENFVPRQVLQAQGSVMTNKYAEGYPG
NRYYAGCKHHDKVENLAKERALDLFGGDHANVQPHSGSQANFAAYAAVLDPGDKILGPVL
AHGGHLTHGHGVNFSGELYDFGTYAINKETERFEKEDILEAAREHDPDLIVMGYSAYPRE
FEFEMFREVADEVDALLMADIAHISGLVAGGKHPEPFPHCDIVTTTTHKSIRGARGGMIL
CKEKYAEDVDKAVFPYTQGGPLMHQIAAKAVSFKEAQRDSFEEYAEQIIKNTEALAEGLR
NEGLKLVSGGTDNHLVLVDLRNEEVTGKQAESLLEEIGVVCNKNMVPYDPESPFVTSGIR
LGTPALTTRGMKEKELEQIGEMIARRVKNPEDGKMEEKMKEKVSEILEEFPLYENSKVKY
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccgcgatctggaagatgccgacccggaagtttaccaagcactgaacgatgag
atagagagacaagaatccgaatccctggagatgattgcctcggagaactttgtgccgaga
caggtacttcaggcacagggatcggttatgacaaacaagtacgcggaaggatatcccgga
aaccggtactatgcgggctgtaaacaccacgataaagttgagaacttagcgaaagaacgc
gccctggatctttttggcggcgaccacgcgaacgttcagccacactccggaagccaggcg
aacttcgcagcgtatgcggcagttttagatccaggcgataagatactggggcctgtacta
gcccacggcggccatttaactcatggacacggcgttaacttctcaggcgagctatatgat
ttcggaacctatgctatcaacaaagagaccgagcggttcgaaaaagaagacatcttagag
gccgctagagaacacgatccggatctcatagtcatggggtactcggcttacccacgcgag
ttcgaattcgagatgttccgcgaagtagctgatgaggtcgatgccttgctgatggcagat
attgctcatatttccggattagtcgcgggcggcaaacatcccgagcctttcccacactgt
gatatcgttacaaccacgacccacaaatcgatccggggcgcacgtggcggaatgattctg
tgtaaggaaaagtacgccgaagacgtcgataaggcagtctttccgtacactcagggcgga
cctttgatgcatcagatcgcagcgaaagcagtcagcttcaaggaagcacagcgcgatagc
ttcgaggaatacgccgaacagataattaagaacacagaggccctagctgaaggattaaga
aatgaaggtttgaagctggtttcaggcggaaccgacaaccacctggttttagtggatctt
cgcaacgaggaagtcactggcaagcaagccgaatccctgcttgaagagatcggcgttgtc
tgtaacaagaacatggtgccttacgacccggagagtcctttcgtaacctcagggataaga
cttggaacgcctgcgctgacgaccagaggaatgaaagaaaaagagttagagcagatcggc
gagatgatagcacggagagtcaagaatcctgaagacggaaaaatggaagaaaaaatgaag
gagaaagtatcggagatacttgaagagttcccgctttacgagaactcaaaggtcaagtac
tag
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