Candidatus Nanohalococcus occultus: SVXNc_0172
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Entry
SVXNc_0172 CDS
T10160
Symbol
rpsC
Name
(GenBank) Ribosomal protein S3
KO
K02982
small subunit ribosomal protein S3
Organism
nocc Candidatus Nanohalococcus occultus
Pathway
nocc03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
nocc00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SVXNc_0172 (rpsC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
nocc03011
]
SVXNc_0172 (rpsC)
Ribosome [BR:
nocc03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SVXNc_0172 (rpsC)
Bacteria
SVXNc_0172 (rpsC)
Archaea
SVXNc_0172 (rpsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
AAA_11
KH_1
V_ATPase_I
SNRNP200_wHTH
Motif
Other DBs
NCBI-ProteinID:
WEL19204
LinkDB
All DBs
Position
complement(152143..153192)
Genome browser
AA seq
349 aa
AA seq
DB search
MKEKQFIDKGARKVRLDEFLERELEGAGYSHSDLVRTPTSTKIVIYAQRPGLVIGRGGSR
IRELTADMEEEFEFDNPQIEVNEIEDADSDAEIVAKSMASWLEKGGSAKRVGYTYLRRVK
ESGVIGVEIEISGKLSGNRGRTEKFSYGYVKRCGNTSKESVDSAYTLARTKPGAIGLKVR
IMKELPDFKHRNVDVTEEILHETVDGETKTEQIAKIIAEAENMTAAAIEEAAEVQEIDME
KVTVDEVRDVFEEMDADEASEVESEEDEADQETEEETESEEAEDEVEETESEDESDESDV
DYAEIVSGTIGDAKDALNDLENVDWEKALQAEKDDKNRTTFIDWLESKV
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaacagttcattgacaaaggagcaaggaaagtacgactagatgagttccta
gaaagagagctagaaggagcaggatactctcactcagatctagtacgtacaccgacatca
acaaagatcgttatctacgcacagcgtccaggactagttattggacgtggcggatcaaga
atccgcgagctaacagcagacatggaagaagaattcgagttcgataaccctcagatcgag
gtaaacgaaatcgaagacgcagacagcgacgcagagatcgtcgcaaagtccatggcctcc
tggctagaaaaaggaggaagcgcaaagagagtaggatacacctacctcagacgcgtcaag
gaatccggggtaatcggtgtcgaaatcgagatctccggaaagctttccggtaaccgagga
cggacagagaagttctcctacggatacgtcaaaagatgtggtaacacatcgaaggaaagc
gttgactcggcttacacgctagcgcgtacaaagccgggcgcaatcggactgaaagtccgg
atcatgaaggagctaccagacttcaaacaccgcaacgtcgatgtaacggaagagatccta
cacgagaccgttgacggcgagaccaagacagaacagatcgcaaagatcatcgcagaagct
gagaacatgacagcagcagcgatcgaagaagcagcagaagttcaggaaatcgacatggag
aaagtaacagtcgatgaagtaagagacgtcttcgaggaaatggatgccgatgaggcctcc
gaagtagaatccgaagaagacgaagccgaccaggagacggaagaagagacagaatccgag
gaagcagaagatgaagtcgaggagaccgaatcagaagacgaatcggatgaatcagacgtt
gattacgcagagattgtatcaggaacaatcggcgatgcgaaagacgctctcaacgaccta
gaaaacgttgactgggagaaagctcttcaggcagagaaggacgataaaaaccgtacgaca
ttcatcgactggctagagtcgaaggtttag
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