Candidatus Nanohalococcus occultus: SVXNc_0310
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Entry
SVXNc_0310 CDS
T10160
Symbol
dnaN
Name
(GenBank) DNA polymerase sliding clamp subunit (PCNA-like)
KO
K04802
proliferating cell nuclear antigen
Organism
nocc Candidatus Nanohalococcus occultus
Pathway
nocc03030
DNA replication
nocc03410
Base excision repair
nocc03420
Nucleotide excision repair
nocc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nocc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SVXNc_0310 (dnaN)
03410 Base excision repair
SVXNc_0310 (dnaN)
03420 Nucleotide excision repair
SVXNc_0310 (dnaN)
03430 Mismatch repair
SVXNc_0310 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocc03032
]
SVXNc_0310 (dnaN)
03400 DNA repair and recombination proteins [BR:
nocc03400
]
SVXNc_0310 (dnaN)
DNA replication proteins [BR:
nocc03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
SVXNc_0310 (dnaN)
DNA repair and recombination proteins [BR:
nocc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
SVXNc_0310 (dnaN)
MMR (mismatch excision repair)
Other MMR factors
SVXNc_0310 (dnaN)
TLS (translesion DNA synthesis) factors
Other TLS factors
SVXNc_0310 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Hus1
Motif
Other DBs
NCBI-ProteinID:
WEL19337
LinkDB
All DBs
Position
complement(308876..309625)
Genome browser
AA seq
249 aa
AA seq
DB search
MFKAELEDVSLLKDSMKTISDLISEGIFQLNEDGVKLVAADPAMVALVDFKIEKDVFESY
DLDEETNVGLNLENLYSILRRANSDDKIILETRGDSKFYITMESSSVREFSLPILNLSED
DMPSTDDLEYAVTAELETKVLESAVKDALVVGDSVVIESDNAGLRVKAEGDQSNVEFEID
GDAEGVLEFSGGNARSMFSLDYLNDMTGAKKLSDTVKLSIGDDFPMRLEFEVPDEALLSF
VLAPRIEEE
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagcggagctagaggacgtctcactactgaaagactcgatgaaaaccatcagc
gatctgatcagcgaggggattttccagctgaacgaagatggtgtaaaactggtagcagcc
gaccctgcgatggtcgcactggtcgatttcaagatcgaaaaagacgttttcgaaagctac
gatctcgacgaggagacaaacgtaggtctaaacttggaaaacctttactcaatcttgaga
cgtgctaactccgatgataaaattatactggagacccgtggagactcgaagttctacatc
acaatggagagttcctcggtaagagagttctcacttccaatcctgaacctctcggaagac
gacatgccctccaccgacgacttggagtatgcggtcacagcagagcttgaaacaaaagtt
ctcgaatccgctgtaaaggacgcacttgttgtcggagactcagttgtaatcgagtccgat
aacgcaggtctgcgcgtcaaggctgagggagatcagtcaaacgtcgagttcgagatcgac
ggcgatgccgaaggagtactggagttttccggcggtaacgcacggtcaatgttctcactt
gattacctaaacgacatgaccggggcaaagaagctttcggatactgtcaagctctcgatt
ggcgatgacttcccgatgagacttgagttcgaagtaccggatgaagcacttttgagcttc
gtactggctccgagaattgaagaagagtaa
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