Candidatus Nanohalococcus occultus: SVXNc_0314
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Entry
SVXNc_0314 CDS
T10160
Name
(GenBank) Uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nocc Candidatus Nanohalococcus occultus
Pathway
nocc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nocc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SVXNc_0314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocc03400
]
SVXNc_0314
Enzymes [BR:
nocc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SVXNc_0314
DNA repair and recombination proteins [BR:
nocc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SVXNc_0314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WEL19341
LinkDB
All DBs
Position
311093..311659
Genome browser
AA seq
188 aa
AA seq
DB search
MDFKQKYSEFFENLDPKYFNEERFVPAVGPEDAKFVLIGEAPGANEVEEGEPFVGRAGNR
MDEILHKIGVDRDELYITNLVKIRPPDNRDPKKDEIKAWAPLLEKELENIEPEAIVTLGN
FASREMLDTSKGISKIHGRTFRKNGWKIMPVYHPAATLYDRSKGPELEKDLRKAFGKRDA
GQQSLKDL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggattttaagcaaaagtacagcgagttcttcgagaacctcgatcccaagtatttcaac
gaggagcgtttcgtaccggctgtcggaccggaagacgccaagttcgtcctgataggtgag
gctcctggcgcaaacgaggtagaggagggagaacctttcgtcggacgcgcaggaaaccgg
atggatgagattcttcacaagatcggggtcgaccgtgatgaactatacattacaaatctg
gttaagatccggccgccggataaccgagatccgaaaaaagacgagataaaggcgtgggcg
ccgctactggaaaaggagctggaaaacatcgagcctgaagccattgtaacacttggaaac
ttcgcatccagagagatgctcgatacctcgaaaggcatcagcaagattcacggccgaact
ttcaggaaaaacggctggaaaataatgccggtctaccatcccgcagccactttatacgat
cggagcaaaggcccggagctggaaaaagacctgcggaaagccttcggaaaacgagatgcc
ggacagcagagcctgaaagacctgtaa
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