Candidatus Nanohalococcus occultus: SVXNc_0361
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Entry
SVXNc_0361 CDS
T10160
Symbol
csdA
Name
(GenBank) Selenocysteine lyase/Cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
nocc Candidatus Nanohalococcus occultus
Pathway
nocc00450
Selenocompound metabolism
nocc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nocc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SVXNc_0361 (csdA)
Enzymes [BR:
nocc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SVXNc_0361 (csdA)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SVXNc_0361 (csdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
Beta_elim_lyase
DUF6400
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
WEL19386
LinkDB
All DBs
Position
354326..355495
Genome browser
AA seq
389 aa
AA seq
DB search
METGKIRDDFPIFQERTELSYLDNAATTQKPAQVIEAVEKFYSQNNSNVGRGLYDLAADS
TKAYSQARKNIAEFIGADADETVFVRGCTEAVNLLASSLDIEGRMALPELAHHSEQLPWR
ENFEEIDFIPVKDGKIDIDAAEELITQKTAVVSVPHVSNVYGTVQPVEQLVELAHENDAL
VVLDAAQSVPSMPVDFHELDVDFAMFSGHKMLGPTGIGVLYGKRNLLEEMTPYQVGGGMV
DSVTKQEVEYKPAPEKFEAGTPNIAGAVGLSAAVDYLRQFEPEEILEHERELNRHLVKQL
RTIEGIKVLSPVEATITSFTAEFAHPHDIAEVLNQNNVAVRAGNHCAQPLMEKHGINGTV
RASPYIYNTEKDVRRLVRAVKEAKRVFDV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccggtaaaatcagagacgacttcccgatatttcaggagcgaacagaactcagc
tatctggataatgcggcaaccactcagaaaccagcgcaggtaattgaagccgtagaaaag
ttctacagccagaataactcgaatgtcggcagaggactctacgatctagcagcggactcg
acgaaagcatacagccaggccagaaaaaacatagcggagttcataggagcagacgcggat
gaaacagtgtttgtccgcggatgtaccgaggcagtgaacttgctggcttcctcgcttgat
atcgaaggacgtatggctcttccagaattagcacatcactccgagcaactgccttggagg
gaaaactttgaggaaatagatttcatacctgtaaaagacggtaaaatcgatatagatgcc
gcagaagaactgataactcaaaaaacggctgttgtatctgttccgcatgtatcaaatgta
tatggtacggttcagccggtcgagcagttagtcgaactcgcacacgaaaacgatgccttg
gttgttcttgatgccgctcagtccgtcccgtccatgccggtcgatttccacgagctggac
gtggatttcgcgatgttttccggccacaaaatgcttgggccgacaggaatcggagtactg
tacggtaaaaggaatttgcttgaagaaatgacgccttaccaggtcggagggggcatggta
gactctgtgaccaagcaagaagttgagtacaaacctgctcctgaaaaatttgaggcaggg
actcctaacatcgcaggagctgttggtttatccgcggccgtcgattacttacggcagttc
gaacccgaagaaattctagaacacgaacgagagctaaacaggcatctagtcaagcagttg
agaactattgaaggcataaaagttctttcacctgtagaagcaacgatcacatcgtttaca
gcggagttcgcacatccgcatgatatagcagaagttttgaaccagaacaatgtagctgtc
cgggctgggaatcactgcgcacaacctttaatggaaaaacatggtataaacggaacggtc
agagcatctccttatatttacaatactgaaaaagatgttcgcagactcgtccgcgcggta
aaggaagccaagagggttttcgatgtatag
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