Candidatus Nanohalococcus occultus: SVXNc_0402
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Entry
SVXNc_0402 CDS
T10160
Symbol
pus10
Name
(GenBank) tRNA U54 and U55 pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
nocc Candidatus Nanohalococcus occultus
Brite
KEGG Orthology (KO) [BR:
nocc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nocc03016
]
SVXNc_0402 (pus10)
Enzymes [BR:
nocc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SVXNc_0402 (pus10)
Transfer RNA biogenesis [BR:
nocc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SVXNc_0402 (pus10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
TruB_N
Motif
Other DBs
NCBI-ProteinID:
WEL19426
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Position
381119..382366
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AA seq
415 aa
AA seq
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MNPVKEKADALLEEKLCDHCLGRQFAKLGYGLENYERGAIIRKEPDLEESDFDPENVPEE
AEFEGSNIDSSECKVCGGLFARVDEYADMVISSFDRYELSTFLVGIRPPESVIAAEEDLW
EDYGVEFTEPVKTELSRLIGKRVEKELGIEVDFERADIMAVVDMREGKERIELQVNSLLV
YGQYNKYSRELPQTEWHCRNCRGDGCDECDWTGKNYPTSVQEIIQEPFMRETKAIDAKFH
GGGREDVDAKCLGKREFVLELREPIHRDLDLEALAEEVNESEDVEIFNVRPAGKDEAAEI
KQKHADKRYRALVELEEDIEEESLEKLQEIVGEVKQFTPNRVQHRRAEKVRKREVFEIEA
ERVGEKKIELEIEAEAGTYIKELISSDEGNTEPSVSDILGTKAECVELDVLWVEK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagtaaaagagaaagctgatgctttgcttgaagaaaaactatgtgatcactgt
ctcggaaggcagtttgccaagctaggttacggccttgaaaactacgagagaggcgcaata
ataagaaaagagcctgatctagaggaatcggacttcgatccggaaaacgtcccggaggaa
gcggagttcgaaggttcaaacattgattcttccgaatgtaaagtgtgtggtggtttgttt
gctcgtgtggatgagtacgctgatatggtgataagttctttcgatcgttacgagctatcg
actttccttgtcggaatccgtccgccggaaagtgttatagccgcagaggaagacttatgg
gaagattacggcgttgagttcaccgagccggtaaaaaccgagttatctcgcttgatagga
aaacgcgtggaaaaagagcttgggatcgaggtggatttcgagcgagcggacatcatggcg
gttgtagacatgcgggagggaaaggaacgtatcgagctacaggtcaactcgcttctggtc
tacggccagtacaacaagtactcaagagagctaccgcagaccgaatggcactgtagaaac
tgccgtggagacggctgcgatgaatgtgactggactggtaaaaactatccgacgagcgtc
caggaaattatccaggagcctttcatgcgtgaaaccaaagcgatcgatgcgaagttccac
ggcggaggccgagaggacgttgacgcaaagtgcctgggtaaaagagagttcgtactcgag
ctgagagaaccgatccacagagaccttgatcttgaagcactggctgaagaggtcaacgaa
agcgaggacgtagagatattcaacgtgcggccggcaggaaaagatgaggccgcagagatc
aaacagaaacacgccgacaaacggtaccgcgctctggtcgaactcgaagaagacatcgaa
gaagagagcctagagaagcttcaggagatcgtaggagaggtaaaacagtttacgccgaac
cgggtacagcaccgccgggcggaaaaggtccgcaaacgagaagtcttcgagatagaagcc
gagagagttggcgagaaaaagatagaacttgagatagaggccgaagccggtacctacatc
aaggagctgatttcaagcgatgaaggaaataccgagccatcggtatcagatatacttgga
accaaagctgaatgtgtggaattagacgttttgtgggttgaaaagtaa
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