Candidatus Nanohalococcus occultus: SVXNc_0423
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Entry
SVXNc_0423 CDS
T10160
Symbol
srmB
Name
(GenBank) Superfamily II DNA and RNA helicase
Organism
nocc Candidatus Nanohalococcus occultus
SSDB
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Paralog
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Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
P-loop_SecA
SNF2-rel_dom
Phage_integrase
Flavi_DEAD
Cas3-like_C_2
XLF_CC
Motif
Other DBs
NCBI-ProteinID:
WEL19447
UniProt:
A0ABY8CE29
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Position
complement(406234..407349)
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AA seq
371 aa
AA seq
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MTKSFEDLGISEEVVKNLEAQGITEPTTVQRISYPRVKKGYDVLVESETGSGKTLAFSLP
IIEQAKGNKTQALVLTPVRELAKQVEEEISKAAGDSVNTAVIYGGVSYGPQIQDAKKANI
VVGTPGRILDLLKKNKLDVSELEYFVLDEADRMLDMGFQDELEQIMRYVPENRQNLLFGA
TIPGSLEKMCKKYDISPKILRVKKEEHTRNLSEKYVEAKNHEKISTLYTLLKKRDRELSI
VFCKTKNNTRWLSDKLRKNGIDAEALNGDMSQKQREKLVDRFEKGEVKVLVATDVAARGL
DIDDVTHVFNFDVPDTADTYTHRIGRAGRQGREGEAITILEKQDHNTFRRLKRKLDIPRM
KEDLELLDAQV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgactaagagtttcgaagacctaggaatatcagaggaagtggtcaaaaacctggaagcc
caggggatcacagaaccgaccacagtacagagaatatcatacccgcgcgtaaagaaagga
tacgacgtactagttgaatccgagacaggatcaggtaaaacactggcattttcactgccg
ataatcgaacaagcaaaaggaaacaaaacccaggcacttgtattaacgcctgtaagagag
ctagccaagcaggtagaagaagaaattagcaaagcggctggtgactcagtcaacaccgct
gtaatctatggaggcgtaagttacggacctcaaatccaggatgcgaaaaaagccaacatc
gtggttggaacacccggccgaatccttgatttgctgaagaaaaacaagttagatgtatca
gaactcgagtacttcgtgctggatgaggccgaccggatgcttgatatgggattccaggac
gagctagaacagatcatgcgttacgtcccggaaaaccgccagaacctgctgttcggggcg
acaattcccggatcgctggaaaagatgtgtaaaaaatacgatatctcaccgaagatcctg
agggtgaaaaaagaggaacacacccggaacttgagtgaaaaatacgtagaagcgaagaac
catgagaaaatatccaccctctacactttactgaaaaaacgggatagagagctatcaatc
gttttctgtaagacgaagaacaacactcgctggctttccgataagctgcggaaaaacggt
atcgacgcagaggcactcaacggcgatatgagccagaaacaaagagagaaactcgttgac
cgtttcgagaaaggagaggtaaaagtactggtggcaaccgatgtagccgcacgcgggctt
gacatcgacgatgtaacccacgtcttcaacttcgatgtaccggataccgccgatacctac
acccacagaatcggacgagccggccgccaaggacgggaaggagaagcaatcacaatcctg
gaaaaacaggaccacaacaccttcagaaggcttaaacggaagctggatatcccacgcatg
aaagaagaccttgagctactagacgctcaggtctga
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