Candidatus Nanohalococcus occultus: SVXNc_0426
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Entry
SVXNc_0426 CDS
T10160
Name
(GenBank) Putative metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain
KO
K07041
uncharacterized protein
Organism
nocc Candidatus Nanohalococcus occultus
Brite
KEGG Orthology (KO) [BR:
nocc00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
SVXNc_0426
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
KH_TffA
Lactamase_B_6
Lactamase_B
RMMBL
Lactamase_B_2
KH_2
Lactamase_B_3
KH_KhpA-B
KH_1
Motif
Other DBs
NCBI-ProteinID:
WEL19450
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Position
409356..411233
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AA seq
625 aa
AA seq
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MGELEDVKDLLPANASISDTRYEASDIVIYTDSKEFFLDHSEAVRKIVSNLKKRVEVRPS
SKLFSKPENAEKKLKDIIPSEAGFDEAIFQPSLGKVIIRAEKPGRVIGNNGRTLDEIKKK
TLWAPQVERVPAIKSKIVDRARELTVEDPEFRKDFLHDVGKKIRRGDPPEDEWVRVGGLG
GFRQVGRSSVLLQTEQSTVLMDAGINPSAEPGTKDNFPILNAPELDLQDLDAVVLSHAHM
DHCGMIPYLYKMGYDGPLYCTKPTRDLMIMLALDYIGIAHQENQDAPYDSSAIKKAIKRT
ITPDYGEVTDITSDMKLTLRNSGHIIGSSLCHVHVGEGIHNVLYTGDYNYDKSEMLRPAD
TNFKRVETMITESTYGGKDDRQQPREEAQKKFLSKMKQTLSKGGKVIVPVFAIGRSQEIL
GMLADELDRDYFDYPLYIDGMIKDANALHTAYPEFLSKKVQKKIFQEENNPFTNDQLHSI
GSNSEREDVIEGGPSIILATSGMLTGGPILSYLEALADDPKNTMIFVGYQASGTLGNKIQ
QGRSTVNINGKRVDVNLDVNTVSGFSAHSDRQQIINFSKNLRSSPNRVLTNHGEESKCFS
LASTLHKVLHIDTSAPQNLDVNRLN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactagaagacgtaaaagacctgcttccggcaaacgcttctatctcggatacg
cgttatgaagcatcggacattgtaatctatactgacagcaaggagtttttcctggatcac
tccgaggctgtcaggaagattgtttcaaacttgaaaaaacgcgtcgaggttcgtccatcc
tcaaaactcttcagcaaaccggaaaacgctgaaaagaagcttaaagatattattccaagc
gaggcgggcttcgatgaagccattttccagccttcacttggaaaagttataattagagcg
gaaaagcctggccgtgtaatcggaaacaacggcaggactttagacgagataaagaagaaa
actctctgggcgccacaggtcgagcgtgtcccggcgatcaaatcaaagatcgttgaccgc
gcccgtgaactaaccgtagaggaccctgagttccggaaggacttccttcacgatgtaggg
aaaaagatccggagaggagatcctcccgaagacgaatgggttcgcgtaggcggacttgga
ggcttccgtcaggtcggacgctctagcgtcctgcttcagacagaacagtcaacagttctg
atggatgcgggtatcaatccgagtgccgagccaggaaccaaggataacttcccgattctg
aacgccccagagcttgacctacaggacttggatgctgtggttttgagccacgcacacatg
gatcactgcggtatgattccttacctgtacaagatggggtatgatggtcctctgtactgt
acgaagccaaccagggatctgatgatcatgctggctcttgactacattggtatcgcacat
caggaaaaccaggatgcgccatatgattcgagtgctatcaagaaagcgatcaaacgcaca
atcacgccggattatggagaggtaactgatatcacctcggatatgaaacttaccttgcgc
aactcgggtcacatcatcggaagctcgttgtgtcacgtccacgtgggtgagggaatccac
aacgtgctttacacaggggattacaactacgataaatccgagatgcttcgtccggcagat
actaacttcaaacgcgttgagacgatgatcacggaatcgacctacggaggtaaagacgac
cgacagcagccgagagaggaggctcagaaaaagttcctctcgaagatgaaacagacactt
tccaagggcggaaaggttattgtgcctgttttcgctatcgggcgctcacaggagatactg
ggtatgctggccgatgaactggacagagactactttgattacccgctgtacatcgacggt
atgatcaaggatgcgaacgctttacacacagcgtaccccgagttcctatcgaagaaggtt
cagaaaaagatcttccaggaggagaacaatccgttcaccaacgaccagcttcactcaatt
ggatcaaactcggaacgtgaggacgttatagagggcggtccttcaatcatcctcgcaacc
tctggtatgcttacaggaggtccgatcctatcctacctggaggcccttgccgatgatccg
aaaaacaccatgatctttgtagggtatcaggcatctggaacccttggtaacaagatccag
cagggacggtcaacggtcaacatcaacggaaaacgagtggatgtaaacctggatgtaaat
acagtatcaggtttctctgcacacagcgaccgacagcagatcatcaacttctctaagaac
cttcgaagctctccgaacagagttcttacgaaccacggggaggaatcaaagtgtttctcc
ttagctagtacgcttcacaaggttctacacatcgatacttctgctccgcagaacctcgat
gtcaaccgtctgaactag
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