Candidatus Nanohalococcus occultus: SVXNc_0467
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Entry
SVXNc_0467 CDS
T10160
Symbol
sua7
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
nocc Candidatus Nanohalococcus occultus
Pathway
nocc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nocc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SVXNc_0467 (sua7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nocc03021
]
SVXNc_0467 (sua7)
Transcription machinery [BR:
nocc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SVXNc_0467 (sua7)
Prokaryotic type
Archaeal type
TFB
SVXNc_0467 (sua7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_RRN7
FtrD-like
Sigma70_r4
Rrf2
GntR
HTH_Crp_2
HTH_11
Zn_ribbon_4
HTH_24
HVO_A0261_N
Sigma70_r4_2
ApbE
HTH_23
Auto_anti-p27
Ephrin_rec_like
HTH_3
Cas12f1-like_TNB
zf-C2HC_3
DmmA-like_C
Motif
Other DBs
NCBI-ProteinID:
WEL19487
UniProt:
A0ABY8CE50
LinkDB
All DBs
Position
complement(430555..431526)
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AA seq
323 aa
AA seq
DB search
MSTENTVNSSEDTIPVKRSQIQEAKGDDVQCSTCGSTRFREEGGEVYCRKCGTVVDEDRV
DTSKEWRAFNSEEREEKRRVGSPITFTKADKGMGTKIGHNAEMNKVSGRKRTQYYRMRKW
DKRLSNSRSRGLQQALKELQRVSSDLNLPESVYEEAARLTEKAQEEGIIQGRGIDATVGA
LVYLVARKQDVPRTLEEVAEQVPIKKRKLGKAYRHTARELDMQIKPGRPEDFIPRYASQL
GLSGEVQAKARGIIQDARNTDALAGRSPTGIVAASLYIATKLEGEKLTQREIADEVGVTS
VTVRKNYKDLAESLGIEEELENA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgaaaatacggttaattctagcgaagatacaattccagtaaaaagatcacag
atacaggaagcaaagggagatgacgtccaatgctctacctgcggttccacaagatttaga
gaggaaggtggggaagtatactgccggaaatgtggaacagtagtcgatgaagaccgtgta
gacacttctaaagagtggagagcattcaactccgaagaacgcgaggaaaaaagacgtgtc
ggaagcccaatcacctttacgaaggcggataagggaatgggaacaaagataggccataac
gcagagatgaacaaggtctcaggacgtaaacgaacacagtactaccgtatgcgtaaatgg
gacaagagactgagcaactcacggagcagaggtctacaacaggcgctgaaagaactacag
agagtttccagcgatctaaaccttccggaatctgtctacgaggaagcagcccgtctaacc
gagaaagcacaggaggaaggaatcattcagggccgtggaatcgatgcgacggtcggagcg
ctagtatatcttgtcgcacgtaaacaggatgttccaaggacgctggaggaagtcgccgaa
caggtacctatcaagaagagaaagcttggaaaggcatacagacacaccgccagagagctt
gacatgcagatcaagccaggacgaccagaagactttatcccgcggtacgcatcacagctc
ggactttcaggagaggtccaggcaaaagctcgtggaatcatccaagatgcccgtaacacg
gacgcgctggcaggccgcagccctacaggaatcgtagcagcatccctctatattgccaca
aagcttgagggagagaaactcacacagcgagagatcgcagacgaagtcggagtaacatcc
gtcaccgtcagaaagaactacaaggatctcgcagagtcactagggatcgaggaagaactc
gaaaacgcctag
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