KEGG   Candidatus Nanohalococcus occultus: SVXNc_0596
Entry
SVXNc_0596        CDS       T10160                                 
Symbol
recB
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
nocc  Candidatus Nanohalococcus occultus
Brite
KEGG Orthology (KO) [BR:nocc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nocc03400]
    SVXNc_0596 (recB)
Enzymes [BR:nocc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SVXNc_0596 (recB)
DNA repair and recombination proteins [BR:nocc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SVXNc_0596 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_11 NAF ResIII
Other DBs
NCBI-ProteinID: WEL19612
UniProt: A0ABY8CEJ2
LinkDB
Position
complement(530935..533241)
AA seq 768 aa
MTDPNKQQKQLIENTEGTYLVDAGAGTGKTFTITRRYARIVGKKGVEPEDVFLATFTRNA
AEEMSERIVELTEFEPGRIFEAPISTFHSHCQKILERHGFNAPELLGIEEKITEEVDVME
SQVRERQEFKEFYSGFKAENTEYNDFYRITEASGVLGLLKTLASKGIFPTESSWFGEAEK
YLDGDYERFKDVFKEMNKPRETSNGQRQSELRDRLYSYRWKDFPEDAPDVAEIRGGRGTK
SVRQDFMRRSFEENRDQLKSFVHDLYYEYLEHCLSRNYLNFPFIMALSYVLLHERPEIRE
KESFEYVMIDEFQDTNEIQLKLALLLSEEPNIAAVGDWKQSIYSFQHASVENIQRFQKRL
EKYLEELQEAEKTLDIGEVERIELKQNYRSGQKILDFSEHALELPAHRRENVPEPELVSL
ESKTGFESSKIERFTSENEPKAVLSRIQEIIDNEKYLKEEGEILEYGDIAVLTRTRRFGL
ELQELASTYGIPVEYEGGVELFKTPQALLLLAWLRILNSDSLRGWAVVLEHAGYSLDEAK
AILDEENKSYPPDMKAFREKLESFDTVKAVANTVFEHYGYENEVSDRIIEVIQDAFRSTF
MNTGSLISFIEDNIEEGEIYQVETRGSENSVTVQTVHAAKGLEYPAVFIADVNKGVFPSQ
NSGFSVLKYQDPVGLRQRKKFDSEYGFSFDNWRYEILSKCMAGDYDEERRLMYVAMTRAE
NHLFFSAEEGKESPFYENLDLDEKTVEPELQAVEISEEDRVTFDIEDS
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgactgatccgaacaaacagcaaaaacagttaatcgagaacacggaaggaacctaccta
gtcgatgccggagcaggcacaggaaagacgttcactataacccgcaggtacgcccggatc
gtcggtaagaaaggggtcgagccggaagatgttttcctcgcgaccttcacgcggaacgcg
gccgaggagatgagcgagcgaattgtcgagctgacggagttcgagcctggccgtatcttc
gaggcgccgatctcaactttccacagccactgtcagaaaatactggagcgccacgggttt
aacgcaccggagcttcttgggatagaggaaaagataaccgaggaagtcgatgtgatggaa
agccaagtcagggaacgccaggagttcaaagagttttacagcgggttcaaagcagaaaac
accgagtacaacgatttctaccgtataaccgaggcttccggagttctcggactgttaaag
accttggcctcgaagggaatcttcccgacagaaagttcctggttcggagaggctgaaaaa
tacctggatggggactacgagcgtttcaaggatgtcttcaaggagatgaacaagccacgg
gagacctcgaacggtcaaagacaaagcgagttaagagacaggctttacagctaccgctgg
aaggacttcccggaagacgctccggatgtagccgagataagaggtggtcgtggaaccaaa
agcgtacgccaggatttcatgcgacggtccttcgaggaaaacagagaccagctcaaatcc
ttcgtacacgatctgtactacgagtaccttgaacactgtctttcccggaactacctgaac
ttcccgttcatcatggcactttcctacgtactgttacatgagcgcccggagatacgagag
aaagaaagcttcgagtatgtcatgatcgatgagttccaggacaccaacgagatccagttg
aaactcgcacttttactctccgaggaaccgaatattgcggcagtcggggactggaaacaa
agtatttacagcttccagcacgcatcagttgagaacatacagcggttccagaaacgactt
gaaaaatacctagaagagcttcaggaggcggaaaaaaccctggacataggtgaggtcgag
agaatcgagttaaagcaaaactacaggtccggacagaaaatacttgatttttcagaacat
gcacttgagctgcccgcccatagacgggaaaacgttcctgaaccagaactggtcagcctt
gaatcaaagaccggtttcgaaagctcgaagatcgagcggtttacaagcgaaaacgaacct
aaagcagttctatcccgtatccaggaaataatcgataacgaaaaatacctcaaggaagaa
ggtgagatacttgagtacggggatatcgcggttctcacccgcacccggcggttcggactg
gagttacaggagctggcgagtacctacggcatacctgtcgagtacgagggcggggttgaa
ctgttcaaaacacctcaggcactattactgctggcatggctgcgtatacttaactccgat
tccctgagaggctgggctgtcgtgcttgaacacgccggttacagtcttgatgaagccaaa
gccattctggacgaggagaacaaaagctatcctccggacatgaaggcattccgcgaaaag
cttgagtccttcgataccgtcaaagcggttgcgaacactgttttcgaacattacgggtac
gaaaacgaggtttccgatcggataatcgaggttatacaggatgcgttccgctcgacgttc
atgaacaccggcagcctgatcagctttatagaagacaatattgaggaaggagagatctac
caggtggaaacccggggatcggaaaacagtgttacagtccaaaccgttcacgcagcaaaa
ggattggagtacccggcggttttcatcgccgacgtaaacaaaggagtgtttccaagtcag
aactccggtttctcggttctaaagtaccaggatcctgtgggtctgcgtcagagaaagaag
tttgactctgaatacggtttcagcttcgataactggcggtacgagatactctccaaatgt
atggccggggattatgatgaagagcggcgtttgatgtacgttgcgatgacccgtgcggaa
aatcacttgtttttctcggctgaggaaggcaaggagtctccgttctacgagaacctggat
cttgatgagaaaactgttgaaccagagcttcaagcggttgaaatctctgaagaggataga
gtgactttcgatatagaagattcttaa

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