Candidatus Nanohalococcus occultus: SVXNc_0692
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Entry
SVXNc_0692 CDS
T10160
Symbol
sua7-2
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
nocc Candidatus Nanohalococcus occultus
Pathway
nocc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nocc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SVXNc_0692 (sua7-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nocc03021
]
SVXNc_0692 (sua7-2)
Transcription machinery [BR:
nocc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SVXNc_0692 (sua7-2)
Prokaryotic type
Archaeal type
TFB
SVXNc_0692 (sua7-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_RRN7
GFA
HTH_AsnC-type
Zn_ribbon_tTFIIB
FtrD-like
Cas12f1-like_TNB
Auto_anti-p27
Trm112p
Zn_ribbon_CSL
Zn_ribbon_PaaD
Lar_restr_allev
Zn_ribbon_9
HTH_24
RB_B
HTH_Tnp_ISL3
Ribosomal_S27e
Zn_ribbon_LysW
DUF7573
Motif
Other DBs
NCBI-ProteinID:
WEL19706
UniProt:
A0ABY8CK51
LinkDB
All DBs
Position
complement(612310..613428)
Genome browser
AA seq
372 aa
AA seq
DB search
MSDKDTVSDQNVPRREFDSYQVPDSWQEDEEDNNESETPESQEGEAQEAPESVTDGEGYE
IKQEEAEEGDTVLTCPECGAQRFEEDSAEGQLICVDCGLVIDENRIDESAEWRAFNKEER
EKKARAGQPLTYTKHDMGVSTEIGKGSGELYKVSGNKRAQYYRLRKWHKRLTKSKDRNLG
FALSELNSMISNLNLPESVHEEVARLYEKAVDQGLVRGRSMESIISALLYIVARKQGTPR
TLDEISDASGIEKREIGRAYRYVARELGLRILPAKPQDYVPRFAGKLQLSGEVQARARQI
LKEARERDLLSGKGPTGLAAAALYIAAVIEGEKRTQREVADVVGVTEVTIRNRYKELAEK
LGLEEELEEKSN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaagatactgtatcagaccagaacgttccaagacgagaattcgacagctac
caagtgccggacagctggcaagaggatgaagaagataataacgaatcagagactccagag
agtcaggaaggcgaagctcaggaagcaccagagtctgttacagacggagaaggctacgag
atcaagcaggaagaagcagaagaaggagacacagttttaacctgtccagagtgtggcgca
cagcgtttcgaggaagacagcgccgaaggacagctaatctgtgtagactgtgggcttgta
attgatgaaaacagaatcgacgaatccgcagaatggagagccttcaacaaagaagaacgt
gagaaaaaagcacgagcaggacagccactaacatatactaaacacgacatgggagtctcc
accgagatcggaaaaggaagtggagaactctacaaagtcagtggaaacaaacgcgcacag
tactaccgtttgagaaaatggcacaagagactgacaaagtcaaaggaccggaaccttgga
ttcgcactaagcgaactcaactcgatgatttccaacctcaacctaccggaatcagttcac
gaggaagtcgcccgactatacgagaaagcagtcgaccagggactagtccgcggacgctca
atggaatcaatcatctcagcactactatacattgtagcccgtaaacagggaacaccaaga
acactggatgaaatttccgatgcatccggaatcgagaaacgagagatcggacgagcatac
agatacgtggcaagagaacttggactaagaatcctaccggccaaaccacaggactacgtg
ccaagattcgcagggaaactccagttaagcggagaagtccaggcacgcgcacgacagatt
ctcaaggaagcacgtgaacgagaccttctatccggtaaagggccgacaggactcgccgca
gcagcactctacatcgccgcagtaatcgaaggcgaaaaacgaacacagagagaagtcgcc
gacgtagtcggtgtgacagaagtaacgatcagaaaccgttacaaagaactcgctgaaaag
cttggcctcgaagaagagctagaagagaaatctaattag
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