Nocardioides sp. L-11A: QJ852_04000
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Entry
QJ852_04000 CDS
T10892
Name
(GenBank) Ig-like domain-containing protein
Organism
nocd Nocardioides sp. L-11A
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_9
Cadherin_4
NHL
Cadherin_5
Vgb_lyase
TrAA12
Sortase
CshA_repeat
TEN_NHL
SGL
SBBP
Ig_BT4661_3rd
Phytase-like
Ldl_recept_b
SdiA-regulated
Motif
Other DBs
NCBI-ProteinID:
WGX97605
LinkDB
All DBs
Position
complement(878354..884071)
Genome browser
AA seq
1905 aa
AA seq
DB search
MKLYRIALAAALAVSGALVAATTTAVPARAAAPLLGCDTLAASGYRQSTIATGLTTPRGI
DVDTAGVVYVGNGSQVDKLTPSGGSYARTTAGGNFAPYGLAVGTDGTIYGIDRPNGRVEK
LVPSGGAYTQENVAWGLGGTVGALDVDHTGTVFIGDTAHQRITKLSPGGGGYTPSGVQSL
PLPTEVHGVSVAGNTLFFTMGDTVRSLNIPGNTPGNPLPTTGLSSPGGLDLDPSDAVLSL
VVADTGNDRLVRIGGAPDDQRTVPTEGLDQPQDLAVDAGGSIYVADTGNGRVVKLTPVAV
DAVADTATTSSGDAVTTDALDNDSTDGTDLADAPTIAENPAHGTASVNANGTITYTPAAG
FSGTDSYTYAVRDTSGSVCATTKVTVTVAQGNACDPLGTTGGHARTILPAGIDYPGDLEV
DADGNVLVPDPDNGQIVKLTPTASGYVRSVAATGLPGVTNLAIAGDGRLYVTSWSTGTVV
RLTPSGSTYTSATIATGADLSQAAGIDVAANGDLYVITSDAGGADGKLLRLSAASSYSQQ
VLATGLEYGQDVAIDDEDRVFVLSSDGVQRLEDLGGGSHDLVTVTSSVQDAEGLAFDDDG
RLYVADTWNDRILVLTPSGSGWTESDLPGWGDDNGPAGVAVGPDGTVVATDASINEVILL
GPATIGARDDSTTAGANGSVTTDVRANDTTNATLGMPSIAAAPAHGTAEVNDDGTVTYTP
TPGWSGTDHYDYLIRDEEAQVCAVARVSITVTTSDGCGDIPSKEYGYDIVVSDGDFVEPT
GIAVDPRNFIFISDAAGAKVSAWAPGAGPSTIDDRPDLDPQGIAADTQGNVYYADERDHE
IVKLTWSDDDNGYPTRTVLAGNLQRPAGVAVDADGNVFFTERSSGHVHRLTPSGGAYTSS
LVASGLDNPRGVAVDADGNLFVVDRGNGRVVKLTPSGPDYAQSVVSTSLSEPIGVTVRPD
GAVLVADTGNRRVLQLTPNGSGYAQTVAQRWDARTPTWIVAPDNERLIVADPENDDILMM
VTVGINAEDDTAATTLQTPVTTDVHANDTGIDGVDAVTTVSVQPDGGTASIEPDGRITYT
PQAGFSGTDHYVYQTRVTLEGSAEFIGIVAYFHIDVCDSAEVTVTVPNVFTAGPGVTTPQ
NKPVTTPLAGIATTQGKPLDATAVTQDQAPDHGSLSIDGTTGAVTYTPDDGYSGDDSYRV
QVCDTADPVECTTITVPVAVEANTVTAVDDSATTDVVTAVTTDVTDNDVSASGQAFDDPT
VTSGPGHGTTSVGAGGITYTPATGFSGEDSYDYQACDTSTPTPICDTGAVTITVRNGFLP
GPDVQTPQNTPLTTALDDHVTTSGRPLDPASVTSVTAPGHGVIAIDPATGAVTYSPTSGY
SGADSYTIEVCDTSAPVQCADLMMGVTVGANTVTAGDDTASTTVGRAVATDVTVDDTSAS
GQALGDPTVSSGPAHGNTSATGGTITYTPDAGFSGEDSYDYQVCDTSHPTPICDTATVTV
TVDNVFTTGATITTAYNSPVTTGLDDYATVTGMPLDPAATTSVTAPIHGTITIDPDTGAV
TYNPTPGFSGDDAYTVQVCDTSAPVQCTEATIKITVQPKPAPTSGPTLTVHAPDKATLKV
TKTGNVKPVALTGSVTITGINPATRVAGRAITGTATLYGPARKPGPGMCTPAAAVATVPF
APVNGTTALPPVRVTRPGHYTWVASTSADGDNTASTQSCGSPDSTTLVHRPALPAKVTVK
TGYTGVVADPSAHGRKLRPARISIPGIRLDARVDTVGIRKRNMVIPTNTARGGWLAGSAA
PGESVGSTVIAGHVSDRGDRPGAFGRLRNARPGQIVTVRTADGTRLRYRIQSVTTQPRAK
GLTGTATSTTGGHQLTLVTCTGRVTYRNGNFHYTKNLVVTATPIG
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctaccggatcgcactcgccgcagcactcgccgtcagcggcgcactggtcgcc
gccaccacgacggccgtgcccgcccgggccgcggcccccctcctcggctgcgacaccctg
gcggcgtcgggctaccgccagtcgaccatcgccaccgggctcaccaccccccgtggcatc
gatgtcgacaccgccggcgtggtctacgtcggcaacggcagccaggtcgacaagctgaca
ccgtcgggcgggagctacgcccgcaccaccgcgggcggcaacttcgcgccgtacggcctc
gcggtggggaccgacggcacgatctacggcatcgaccggcccaacggcagggtggagaag
ctcgtcccgtcgggcggcgcctacacccaggagaacgtggcctggggcctcggcggcacc
gtcggtgcgctcgacgtcgaccacacgggcacggtcttcatcggcgacaccgcccaccag
cggatcacgaagctgtcgccggggggtggcggctacaccccctccggggtgcagtcgctc
ccgctgccgaccgaggtccacggtgtctccgtggccggcaacaccctgttcttcacgatg
ggcgacacggtgcgctcgctgaacatccccggcaacaccccaggcaacccgctcccgacg
accggactgtcgtcccccggcgggctcgacctcgacccgtccgacgcggtgctctccctc
gtcgtggcggacaccggcaacgaccggctggtccggatcggcggggcgcccgacgaccag
aggaccgtgccgaccgagggcctcgaccagccccaggacctcgcggtcgacgccggcggc
agcatctacgtcgccgacaccggcaacggccgggtggtcaagctgacccccgtcgcggtc
gacgccgtcgccgacaccgcgacgacgagttccggcgacgccgtcaccaccgacgcgctc
gacaacgacagcaccgacggcaccgatctggccgacgcgcccaccatcgccgagaacccg
gcgcacggcacggcgagcgtcaacgcgaacggcacgatcacctacaccccggccgccggc
ttctcgggaaccgacagctacacctacgccgtgcgggacacctccgggtccgtgtgcgcg
accacgaaggtcaccgtcacggtcgcccagggcaacgcctgcgacccgctcggcaccacc
ggcggccacgcccggaccatcctgccggcggggatcgactatccgggcgatctcgaggtg
gacgccgacggcaacgtcctggtccccgaccccgacaacggccagatcgtcaagctcacc
cccacggcatcgggttacgtccgctccgtggccgccaccggcctgccgggcgtcaccaac
ctcgcgatcgccggcgacgggaggctctacgtcacctcctggagcaccgggacggtggtc
cggctgaccccgtcgggctcgacctacaccagcgccacgatcgccaccggagccgacctc
tcccaggcggccggcatcgacgtcgccgccaacggcgacctctacgtcatcaccagcgac
gccggcggggccgacggcaagctgctgcgcctgagcgcggcctcgtcgtacagccagcag
gtcctcgccaccggtctcgagtacggccaggatgtggcgatcgacgacgaggaccgggtg
ttcgtcctcagctccgacggcgtgcagcggctcgaggacctcgggggcggcagccacgac
ctcgtcaccgtcacgagctcggtccaggacgccgaggggctcgccttcgacgacgacggc
cggctgtacgtcgccgacacctggaacgaccggatcctcgtgctgaccccctcgggatcg
ggctggacggagtcggacctgcccggctggggcgacgacaacggtccggccggcgtcgcg
gtcggtccggacgggaccgtcgtcgccaccgacgccagcatcaacgaggtcatcctgctg
ggcccggcgacgatcggggccagggacgactccaccacggccggggcgaacggctccgtc
acgaccgacgtgcgtgccaacgacacgaccaacgccacgctcggcatgcccagcatcgcc
gcggccccggcccacggcaccgccgaggtcaacgacgacggcacggtgacctacaccccg
acgcccggctggagcggtaccgaccactacgactacctgatccgcgacgaggaggcgcag
gtctgcgcggtcgcccgggtgagcatcaccgtcaccacgtccgacggctgcggcgacatc
ccgtcgaaggagtacggctacgacatcgtcgtcagcgacggcgacttcgtcgagccgacc
gggatcgcggtcgatccgaggaatttcatcttcatctccgacgcggccggggccaaggtg
agcgcctgggctccgggcgccggaccgtcgacgatcgatgaccgcccggacctggacccc
cagggcatcgccgccgacacgcagggcaacgtctactacgccgacgagcgcgaccacgag
atcgtgaagctcacctggtcggacgacgacaacggctacccgaccaggaccgtcctcgcc
ggcaacctccagcgccccgccggcgtcgccgtcgacgcggacggcaacgtcttcttcacc
gagcgcagcagcggccacgtccaccggctgacgccgtccggcggggcctacacctcctcg
ctcgtggcctccggcctcgacaacccgcgcggtgtcgccgtcgatgccgacggcaacctc
ttcgtcgtcgaccgtggcaacggccgggtcgtgaagctgacgccgtcgggacccgactac
gcccagagcgtggtctcgacgagcctcagcgagccgatcggcgtgaccgtccgtcccgac
ggcgcggtcctcgtggccgacaccggcaaccggcgcgtgctccagctgacgccgaacggc
tccggctacgcccagaccgtggcccagcggtgggacgcgcgcacgccgacctggatcgtc
gcgcccgacaacgagcggctgatcgtcgccgacccggagaacgacgacatcctgatgatg
gtcaccgtcggcatcaacgccgaggacgacaccgcggcgacgaccctccagaccccggtg
accaccgacgtgcacgccaacgacaccggcatcgacggcgtggacgccgtcacgacggtg
tcggtgcagcccgacggagggacggcgagcatcgagcccgacgggcggatcacctatacc
ccgcaggccggcttctccggcacggaccactacgtctaccagacccgggtcacgctggag
gggagcgccgagttcatcgggatcgtcgcctacttccacatcgacgtctgcgactccgcc
gaggtcacggtgacggtccccaacgtgttcaccgccggccccggcgtcaccacgccgcag
aacaagccggtgacgaccccgctcgcgggcatcgcgaccacccagggcaagccactggac
gcgaccgcagtcacccaggaccaggcgccggaccacggttcgctgtcgatcgacggcacc
accggcgcagtgacctacacgcccgacgacggctacagcggcgacgactcctaccgggtc
caggtgtgtgacaccgccgatccggtcgagtgcacgacgatcacggtgcccgtcgccgtc
gaggcgaacacggtcacggccgtggacgactcggcgaccaccgatgtcgtgaccgcggtg
accaccgacgtcacggacaacgacgtctccgcatccggccaggccttcgacgacccgacc
gtcacctccggacccgggcacgggacgacgagtgtcggagccggcgggatcacctacacc
cccgccaccggattctccggcgaggactcctacgactaccaggcctgcgacaccagcact
ccgaccccgatctgcgacacgggtgcggtcaccatcaccgtgcggaacggcttcctcccc
ggcccggacgtgcagacaccgcagaacacgccgctcaccacggccctcgacgaccacgtc
accacctcgggcaggcccctcgacccggcgtcggtgacctccgtgaccgctcccggtcac
ggcgtgatcgcgatcgacccggcgaccggcgcggtcacctacagcccgacctccggctac
tcgggggccgacagctacacgatcgaggtctgcgacacctcggcgccggtccagtgcgcg
gacctgatgatgggggtgacggtcggagccaacaccgtcacggctggtgacgacaccgcc
tcgaccaccgtgggaagggcggtcgccaccgacgtcacggtcgacgacacctccgcctcg
ggccaggccctcggcgacccgaccgtgtcgtcgggccccgcccacggcaacacgtcggcc
accggaggcacgatcacctacaccccggatgccgggttctccggcgaggactcctacgac
taccaggtctgcgacacgtcgcacccgacgccgatatgcgacaccgcgaccgtcaccgtg
accgtcgacaacgtcttcaccaccggcgcgacgatcaccacggcgtacaactcccccgtc
accaccggtctcgacgactacgccacggtcaccggcatgcccctcgacccggccgcgacc
acctcggtcacggccccgatccacggcacgatcaccatcgacccggacacgggcgccgtg
acctacaacccgacccccggcttcagcggggacgacgcctacaccgtccaggtctgcgac
acctcggctccggtgcagtgcaccgaagccaccatcaagatcaccgtccagccgaagccg
gccccgaccagcggacccaccctcaccgtccacgcccccgacaaggccaccctcaaggtc
accaagaccggcaacgtcaagcccgtggccctcaccggctcggtcaccatcaccggcatc
aaccccgccacccgggtcgccggcagggcgatcaccgggaccgcgaccctctacggcccc
gccaggaagcccggccccggcatgtgcaccccggccgccgccgtcgcgaccgtgcccttc
gcaccagtcaacggcaccacggcgctcccgccggtccgggtcacccggccaggtcactac
acctgggtcgcctcgaccagcgccgacggcgacaacaccgccagcacccagtcgtgcggc
tcgccggactcgaccaccctggtccaccggcccgcgctgccggccaaggtcaccgtcaag
acgggctacaccggggtcgtcgccgatccctcggcgcacggccgcaagctccgccccgcc
cggatcagcatccccggcatcaggctcgacgcccgcgtcgacacggtcggcatccgcaag
aggaacatggtgatccccaccaacaccgcccgcggcggctggctcgccggctccgcggca
cccggcgagagcgtcggctccaccgtcatcgccggccacgtctccgaccgcggcgaccgc
cccggcgccttcggcaggctccgcaacgcccgccccggacagatcgtcacggtccgcacc
gccgacggcacccggctgcgctaccgcatccagagcgtgaccacccagccgcgtgccaag
ggactcaccggcaccgccacctccaccaccggcggccaccaactcaccctggtcacctgc
accggccgcgtcacctaccgcaacggcaacttccactacaccaagaacctcgtggtcacc
gccacaccgatcggatga
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