Nocardioides sp. L-11A: QJ852_06315
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Entry
QJ852_06315 CDS
T10892
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nocd Nocardioides sp. L-11A
Pathway
nocd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nocd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QJ852_06315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nocd03021
]
QJ852_06315
03400 DNA repair and recombination proteins [BR:
nocd03400
]
QJ852_06315
Enzymes [BR:
nocd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QJ852_06315
Transcription machinery [BR:
nocd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QJ852_06315
DNA repair and recombination proteins [BR:
nocd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QJ852_06315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WGX98050
LinkDB
All DBs
Position
1353336..1354358
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPTLSEETVDQFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIKIDGVL
HEFSTIEGVKEDVTEIILNLKGLVVSSEHDEPVTMYLRKSGAGDVTGADIAPPAGVEVHN
PDLKIATLSDNGKLELELVVERGRGYVSAVQNKGADNEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVIDVETKPSILPRDAIASAGKTLVELFGLARELNVEAEGIDIGPSPVD
EQLAADLALPVEDLQLTVRSYNCLKREGIHTVGELISRSEQDLLDIRNFGAKSIDEVKAK
LHEMGLSLKDSAPGFDPSAALANYSDDEDDDESFIESEEF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgccccaccctgtcggaggagaccgtcgaccagttccggtcgcgc
ttcgtcatcgagccgctcgagcccggcttcggctacacgctcggcaactcgctgcgtcgt
accctcctctcctcgatccccggtgcctcggtcaccagcatcaagatcgacggcgtcctc
cacgagttctcgacgatcgagggcgtgaaggaagacgtcaccgagatcatcctcaacctc
aagggcctcgtcgtctcctccgagcacgacgagccggtcaccatgtacctgcgcaagtcg
ggtgccggtgacgtgacgggtgccgacatcgcgccgccggccggcgtcgaggtccacaac
cccgacctgaagatcgccaccctctccgacaacggcaagctcgagctcgagctcgtcgtc
gagcggggccgcggctacgtctcggccgtccagaacaagggcgccgacaacgagatcggc
cggatcccggtcgactcgatctacagcccggtcctcaaggtgacctacaaggtcgaggcc
acccgcgtcgagcagcgcaccgacttcgacaagctcgtcatcgacgtcgagaccaagccg
tccatcctgccgcgcgacgcgatcgcgtcggccggcaagacgctggtcgagctcttcggc
ctggcccgtgagctcaacgtcgaggccgagggcatcgacatcggcccctcgcccgtcgac
gagcagctcgccgccgacctcgccctcccggtcgaggacctgcagctgaccgtgcggtcc
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcatcagccgctcggag
caggacctgctggacatccgcaacttcggcgcgaagtccatcgacgaggtcaaggccaag
ctgcacgagatgggtctgtccctcaaggacagcgccccgggcttcgacccgtcggccgcc
ctggccaactactccgacgacgaggacgacgacgagtcgttcatcgagtccgaggagttc
tga
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