Nocardioides sp. L-11A: QJ852_06890
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Entry
QJ852_06890 CDS
T10892
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
nocd Nocardioides sp. L-11A
Pathway
nocd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nocd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QJ852_06890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nocd02000
]
QJ852_06890
Transporters [BR:
nocd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
QJ852_06890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
WGX98163
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Position
1463706..1464935
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AA seq
409 aa
AA seq
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MSLNGSQNASRRLGERDEWAQDVATRLGSSTHLAQTRASLGGLVTAARSRRDVLKWLGIG
AGVAAAPTLLAACGGDSSPAAGASATGIPDGSGRTLSVSVWGGETERAFKETVEPVFRKL
TGAKVQYDTGSGGERFNKLLAQASAPTVDVFVNSGENVFQANRQGLLADIDTRRVPNAAD
IADWAKLFPYGISYGLVAFGLTRAAGVPALTSWSDLWRPDLAGKLGLPGIGHTQMPMFLI
MAAELNGGSESDIDPGLKALAKLDPAVLQYFWGEWADRAKAGEVSVVPEFNYSLLGANDA
GVGFTFDFPEEKAIAADNTMAIVKGRPNEDLAHVFLDVAFDADVQTAFCGEWLGSPANVK
ATIAPKIAGRVPLAADILDQVRFFDLGKIATKRAEWTERLNSEVLPSWE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcaacggttcgcagaatgcgtcacgccggctcggggagcgtgacgagtgggca
caggatgtcgcgacacggctcgggtcgtccacccacctggcgcagacgcgcgcgtccctc
ggcgggctggtcaccgcggccaggtcgcggcgcgacgtcctgaagtggctcggcatcggc
gccggtgtcgccgcggcaccgaccctgttggccgcctgcggcggcgacagcagcccggcg
gccggcgcgtcggcgaccgggatccccgacggcagcgggcgcaccctgtcggtctcggtc
tggggcggcgagaccgagcgggcgttcaaggagaccgtcgagccggtcttccgcaagctc
accggcgccaaggtgcagtacgacaccgggtcgggcggcgagcgcttcaacaagctgctc
gcccaggccagcgcgccgaccgtcgacgtcttcgtcaactccggtgagaacgtcttccag
gccaaccggcagggccttctcgccgacatcgacacccgccgggtccccaacgccgcggac
atcgcggactgggcgaagctgttcccgtacggcatctcctacggcctcgtcgcgttcggt
ctcacccgggcggccggcgtgccggcgctgacgagctggtcggacctgtggcggcccgac
ctcgcgggcaagctcgggctgccggggatcgggcacacccagatgccgatgttcctgatc
atggcggccgagctgaacggcggctccgagagcgacatcgatcccggcctgaaggcgctg
gcgaagctcgaccccgccgtgctccagtacttctggggcgagtgggccgaccgcgccaag
gcgggcgaggtgagcgtcgtaccggagttcaactactccctgctcggcgccaacgacgcc
ggggtgggcttcaccttcgacttcccggaggagaaggcgatcgccgccgacaacacgatg
gcgatcgtcaagggtcggcccaacgaggacctggcgcacgtcttcctcgacgtcgccttc
gacgccgacgtgcagaccgccttctgtggcgagtggctcggttcgccggccaacgtcaag
gccacgatcgcgcccaagatcgccggcagggtcccgctcgcggcggacatcctcgaccag
gtccgcttcttcgacctgggcaagatcgcgaccaagcgcgcggagtggaccgagcggctc
aactccgaggtgctgccctcgtgggagtga
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