Nocardioides sp. L-11A: QJ852_11755
Help
Entry
QJ852_11755 CDS
T10892
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
nocd Nocardioides sp. L-11A
Pathway
nocd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nocd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QJ852_11755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nocd03021
]
QJ852_11755
Transcription machinery [BR:
nocd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QJ852_11755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Ketoacyl-synt_C
Motif
Other DBs
NCBI-ProteinID:
WGX99093
LinkDB
All DBs
Position
2465321..2466811
Genome browser
AA seq
496 aa
AA seq
DB search
MFVSSSHRSVPPALLSHPSIAALIERAAPVGRVAAEDLRQAFAAAEVAPAQLKALMAHLS
GLGISVELGSPVEQRAVAAAARKPASATATTAKKAPAPKPPAAPKPPAAAKKAAPAPAPK
AAAPKAGSGEAEAPAVGPDGKKVLPDISDEQFEKDVAADPTIKEDEEEASATSSFVVSAA
DETDEPAQQVMVAGATADPVKDYLKQIGKVPLLNAEMEVELAKRIEAGLFSDEKLAKGGK
LSPKVSEELEWIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAV
EKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGR
EPTPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAIVPADAVS
FTLLQEQLHAVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMS
KLRHPSRSQVLRDYLD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtgtcttcgagccatcgttcggtcccgcccgccctgctcagccacccgtcgatc
gccgcgctgatcgagcgcgccgcgccggtgggtcgtgtcgcggcggaggacctccgccag
gcattcgccgccgctgaggtcgccccggcccagctgaaggccctgatggcccacctgtcg
ggcctcggcatctccgtcgagctcggctcgccggtcgagcagcgcgccgtggccgcggcc
gcgcgcaagccggcgtcggcgaccgcgacgaccgccaagaaggcgccggctcccaagccg
cccgccgctccgaagccgccggcggccgcgaagaaggccgccccggctcccgcccccaag
gcggcggcgccgaaggccggctccggcgaggcggaggcgcccgcggtgggtcccgacggc
aagaaggtgctgccggacatctccgacgagcagttcgagaaggacgtcgccgccgacccc
accatcaaggaggacgaggaggaggccagcgccacgtcctcgttcgtggtgtcggctgcc
gacgagaccgacgagcctgcccagcaggtgatggtcgccggcgcgaccgccgacccggtc
aaggactacctcaagcagatcggcaaggtgccgctcctcaacgccgagatggaggtcgag
ctcgccaagcggatcgaggccggcctgttctcggacgagaagctcgccaagggcggcaag
ctctcgcccaaggtcagcgaggagctcgagtggatcgcggaggacggacgccgcgccaag
aaccacctgctcgaggccaacctgcgcctcgtcgtctccctcgccaagcgctacaccggt
cgcgggatgctcttcttggacctcatccaggagggcaacctcggcctgatccgcgcggtc
gagaagttcgactacaccaagggctacaagttctcgacgtacgccacctggtggatccgg
caggcgatcacccgcgccatggccgaccaggcccgcaccatccggatcccggtgcacatg
gtcgaggtcatcaacaagctcgcccgcgtccagcgccagatgctgcaggacctcggtcgc
gagcccaccccggaggagctcgccaaggagctcgacatgactccggagaaggtcgtcgag
gtccagaagtacggccgcgagccgatctcgctgcacaccccgctcggtgaggacggcgac
tccgagttcggcgacctgatcgaggactccgaggcgatcgtcccggccgacgcggtcagc
ttcacgctcctgcaggagcagctgcacgccgtcctcgacacgctctccgagcgcgaggcc
ggtgtggtgagcatgcggttcggcctcaccgacggccagccgaagaccctcgacgagatc
ggcaaggtctacggcgtgacccgcgagcggatccgccagatcgagtccaagacgatgtcg
aagctgcggcacccgtcgcgctcccaggtgctgcgcgactacctcgactga
DBGET
integrated database retrieval system