KEGG   Nocardioides sp. L-11A: QJ852_11755
Entry
QJ852_11755       CDS       T10892                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
nocd  Nocardioides sp. L-11A
Pathway
nocd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:nocd00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    QJ852_11755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nocd03021]
    QJ852_11755
Transcription machinery [BR:nocd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     QJ852_11755
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r1_1 Ketoacyl-synt_C
Other DBs
NCBI-ProteinID: WGX99093
LinkDB
Position
2465321..2466811
AA seq 496 aa
MFVSSSHRSVPPALLSHPSIAALIERAAPVGRVAAEDLRQAFAAAEVAPAQLKALMAHLS
GLGISVELGSPVEQRAVAAAARKPASATATTAKKAPAPKPPAAPKPPAAAKKAAPAPAPK
AAAPKAGSGEAEAPAVGPDGKKVLPDISDEQFEKDVAADPTIKEDEEEASATSSFVVSAA
DETDEPAQQVMVAGATADPVKDYLKQIGKVPLLNAEMEVELAKRIEAGLFSDEKLAKGGK
LSPKVSEELEWIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAV
EKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGR
EPTPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAIVPADAVS
FTLLQEQLHAVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMS
KLRHPSRSQVLRDYLD
NT seq 1491 nt   +upstreamnt  +downstreamnt
gtgttcgtgtcttcgagccatcgttcggtcccgcccgccctgctcagccacccgtcgatc
gccgcgctgatcgagcgcgccgcgccggtgggtcgtgtcgcggcggaggacctccgccag
gcattcgccgccgctgaggtcgccccggcccagctgaaggccctgatggcccacctgtcg
ggcctcggcatctccgtcgagctcggctcgccggtcgagcagcgcgccgtggccgcggcc
gcgcgcaagccggcgtcggcgaccgcgacgaccgccaagaaggcgccggctcccaagccg
cccgccgctccgaagccgccggcggccgcgaagaaggccgccccggctcccgcccccaag
gcggcggcgccgaaggccggctccggcgaggcggaggcgcccgcggtgggtcccgacggc
aagaaggtgctgccggacatctccgacgagcagttcgagaaggacgtcgccgccgacccc
accatcaaggaggacgaggaggaggccagcgccacgtcctcgttcgtggtgtcggctgcc
gacgagaccgacgagcctgcccagcaggtgatggtcgccggcgcgaccgccgacccggtc
aaggactacctcaagcagatcggcaaggtgccgctcctcaacgccgagatggaggtcgag
ctcgccaagcggatcgaggccggcctgttctcggacgagaagctcgccaagggcggcaag
ctctcgcccaaggtcagcgaggagctcgagtggatcgcggaggacggacgccgcgccaag
aaccacctgctcgaggccaacctgcgcctcgtcgtctccctcgccaagcgctacaccggt
cgcgggatgctcttcttggacctcatccaggagggcaacctcggcctgatccgcgcggtc
gagaagttcgactacaccaagggctacaagttctcgacgtacgccacctggtggatccgg
caggcgatcacccgcgccatggccgaccaggcccgcaccatccggatcccggtgcacatg
gtcgaggtcatcaacaagctcgcccgcgtccagcgccagatgctgcaggacctcggtcgc
gagcccaccccggaggagctcgccaaggagctcgacatgactccggagaaggtcgtcgag
gtccagaagtacggccgcgagccgatctcgctgcacaccccgctcggtgaggacggcgac
tccgagttcggcgacctgatcgaggactccgaggcgatcgtcccggccgacgcggtcagc
ttcacgctcctgcaggagcagctgcacgccgtcctcgacacgctctccgagcgcgaggcc
ggtgtggtgagcatgcggttcggcctcaccgacggccagccgaagaccctcgacgagatc
ggcaaggtctacggcgtgacccgcgagcggatccgccagatcgagtccaagacgatgtcg
aagctgcggcacccgtcgcgctcccaggtgctgcgcgactacctcgactga

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