Nocardioides sp. L-11A: QJ852_12505
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Entry
QJ852_12505 CDS
T10892
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nocd Nocardioides sp. L-11A
Brite
KEGG Orthology (KO) [BR:
nocd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nocd03009
]
QJ852_12505 (rimO)
Enzymes [BR:
nocd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QJ852_12505 (rimO)
Ribosome biogenesis [BR:
nocd03009
]
Prokaryotic type
ribosomal protein modification factors
QJ852_12505 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
WGX99241
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Position
2639875..2641323
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AA seq
482 aa
AA seq
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MTSTSTNPVSVALLTLGCARNDVDSEELAGRLAADGFALVEDPADADTVVVNTCGFVDAA
KKDSIDTLLAAADLKETGRPQAVVAVGCLAERYGAELADSLPEADAVLGFDDYQDISGRL
RSILAGERPHPHTPRDRRLLLPISPAERQAAVETPAAADTDVEIAIPGRSAIRRRLDGGP
MAPLKLASGCDRRCTFCAIPMFRGSFVSRRPSDVLQEAHWLAGQGVKELFLVSENSTSYG
KDLGDLGLLETLLPELVAVDGVERVRVSYLQPAETRPGLVRAIATTPGVAPYFDLSFQHA
SATVLRRMRRFGDPESFLGLLAQVRELAPEAGVRSNVIVGFPGETEEEFQTLCDFLVAAR
MDVTGVFGYSDEDGTEAANLDGKLDDDEIRARVQHLNDLVSELTSERAEERIGSTVEVLV
EEVDPDGTGDGTVEGRAAQQGPEVDGSTRVLGVPGARVGDLLRAVVVDSDGVDLIAEPAG
GQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcacatccacgaaccccgtctcggtggccctcctcaccctcggctgcgcacgc
aacgacgtcgactccgaggagctggccggccggctcgccgccgacggcttcgcgctggtc
gaggatcctgcggacgccgacaccgtcgtggtcaacacctgcggcttcgtcgacgcggcc
aagaaggactcgatcgacaccctgctcgccgcggcagatctgaaggagacgggacgaccg
caggcggtcgtcgcggtggggtgcctggccgagcggtacggcgcggagctggccgactcg
ctgcccgaggccgacgccgtgctgggcttcgacgactaccaggacatctccggccggctg
cgctcgatcctcgccggtgagcgcccgcatccgcacacgccgcgcgaccgtcggctgctg
ctcccgatcagccctgcggagcgccaggccgcggtcgagacgcccgcggcggcggacacc
gacgtcgagatcgccatccccggtcgctccgcgatccggcggcggctcgacggcgggccg
atggcgccgctcaagctggcgagcggctgcgaccggcgctgcaccttctgcgcgatcccc
atgttccgcgggtccttcgtcagccgccgtccctcggacgtgctgcaggaggcccactgg
ctcgccgggcagggcgtcaaggagctcttcctggtctcggagaactccacgtcctacggc
aaggacctcggcgacctcggcctgctcgagacgctgctgcccgagctggtcgcggtcgac
ggcgtcgagcgggtccgggtgtcctacctgcagccggccgagacccggccgggactggtc
cgcgcgatcgcgaccacgcccggcgtggcgccgtacttcgacctttccttccagcacgcc
agcgcgacggtgctgcgccggatgcgccgcttcggcgacccggagagcttcctggggctg
ctcgcccaggtgcgcgagctcgcgccggaggcgggcgtccgctccaacgtcatcgtcgga
ttcccgggagagaccgaggaggagttccagacgctgtgcgacttcctggtcgccgcgcgg
atggacgtcaccggtgtcttcgggtactccgacgaggacggcaccgaggccgcgaacctc
gacggcaagctcgacgacgacgagatccgcgcccgggtgcagcacctcaacgacctggtc
tccgagctgacctcggagcgtgcggaggagcggatcggcagcaccgtcgaggtgctcgtc
gaggaggtcgaccccgacggcaccggcgacggcaccgtcgagggacgcgccgcccagcag
ggtcccgaggtcgacggatccacccgagtgctcggcgtaccgggggcgcgggtcggcgac
ctcctgcgggccgtcgtggtcgactccgacggcgtcgacctgatcgccgaaccggcagga
ggacagtga
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