KEGG   Nocardioides sp. L-11A: QJ852_12955
Entry
QJ852_12955       CDS       T10892                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
nocd  Nocardioides sp. L-11A
Pathway
nocd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nocd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    QJ852_12955 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nocd03400]
    QJ852_12955 (ruvB)
Enzymes [BR:nocd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QJ852_12955 (ruvB)
DNA repair and recombination proteins [BR:nocd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     QJ852_12955 (ruvB)
    RecFOR pathway proteins
     QJ852_12955 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 nSTAND3 RNA_helicase Mg_chelatase AAA_3 AAA_14 Sigma54_activ_2 MCM IstB_IS21 Zeta_toxin NTPase_1 DUF815 AAA_18 ABC_tran NB-ARC NPHP3_N AAA_25 NACHT AAA_28 AAA_19 Parvo_NS1 Rad17 TsaE AAA_11
Other DBs
NCBI-ProteinID: WGX99322
LinkDB
Position
2726652..2727731
AA seq 359 aa
MPFHEDDLEAAEEVHLRSLTAAEAEGDERAVEAALRPRSLDEVVGQGRVRDQLGLVLEAA
RQRGRAPDHVLLSGPPGLGKTTLAMIISHEMNAPLRLTSGPAITHAGDLAAILSGLNEGE
VLFVDEIHRMSRPAEEMLYLAMEDFRVDVIIGKGPGATAIPLDIPPFTLVGATTRAGLLP
GPLRDRFGFTAHLEFYEPHELDLIVHRSAGLLGVELTPDGSAEIAGRSRGTPRIANRLLR
RVRDYAQVRADGVVTRVVAQAALDLYEVDELGLDRLDRAVLDALCRRFGGGPVGVSTLAV
AVGEERETVEEVAEPFLVRNGFLARTPRGRIATPAAWTHLGLTPPALPYDESGPTLFED
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgcccttccacgaggacgacctggaagccgccgaggaggtccacctccgctccctcacg
gccgccgaggccgagggcgacgagcgggcggtggaagccgcgctgcggccccgcagcctc
gacgaggtggtcggccagggccgggtccgcgaccagctcgggctggtcctggaggcggcc
cggcagcgggggagggcgcccgaccacgtgctcctctccgggccgcccggactcggcaag
accacgctggcgatgatcatctcccacgagatgaacgcccctctgcggctcaccagcgga
ccggcgatcacccatgccggcgatctcgcggcgatcctgtcgggcctcaacgagggcgag
gtgctcttcgtcgacgagatccaccggatgtcccgcccggccgaggagatgctctacctc
gcgatggaggacttccgcgtcgacgtcatcatcggcaagggccccggcgcgacggcgatc
ccgctcgacatcccgccgttcaccctcgtcggcgccaccacccgcgccggcttgctgccg
ggcccgttgcgcgacaggttcgggttcaccgcgcacctcgagttctacgagccgcacgag
ctcgacctgatcgtccaccgctccgccggcctgctcggcgtcgagctcacccccgacggc
tcggccgagatcgccggccgctcgcgcggcaccccgcgcatcgccaaccggctgctgcgc
cgggtccgcgactacgcccaggtgcgtgccgacggcgtcgtcacccgtgtcgtcgcgcag
gctgcgctcgacctgtacgaggtcgacgagctcggcctcgaccggctcgaccgcgccgtc
ctcgacgccctgtgccgccgcttcggcggcggcccggtgggcgtctccacgctggccgtc
gcggtcggggaggagcgcgagacggtcgaggaggtcgcggagccgttcctggtccgcaac
ggcttcctcgcccgcacgccgcgcggccggatcgcgacgcccgccgcctggacgcacctg
gggctgacgccgcccgccctgccgtacgacgagtcggggccgaccctcttcgaggactga

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