Nocardioides sp. L-11A: QJ852_14255
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Entry
QJ852_14255 CDS
T10892
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
nocd Nocardioides sp. L-11A
Pathway
nocd00260
Glycine, serine and threonine metabolism
nocd00630
Glyoxylate and dicarboxylate metabolism
nocd00670
One carbon pool by folate
nocd00785
Lipoic acid metabolism
nocd01100
Metabolic pathways
nocd01110
Biosynthesis of secondary metabolites
nocd01200
Carbon metabolism
Module
nocd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nocd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QJ852_14255 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QJ852_14255 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
QJ852_14255 (gcvP)
00670 One carbon pool by folate
QJ852_14255 (gcvP)
Enzymes [BR:
nocd01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
QJ852_14255 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
CoaE
Motif
Other DBs
NCBI-ProteinID:
WGX94316
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Position
complement(2979636..2982479)
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AA seq
947 aa
AA seq
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MSASVGPAPFVRRHIGPDDTQVETMLDRLGYASLDALMDAAVPKSIRATDPLDLPAGVDE
ESAAAELRALAGANVPGESMIGLGYHATLTPAVIRRNVLEDPSWYTAYTPYQPEISQGRL
EALINFQTMVADLAGLHTAGSSLLDEGTAAAEAVALAHRVNRKAQGPFVIDADALPQTID
VVRTRCEGLGIEIVVADLAGGLPAGPVAGVLVQYPGASGRVADIKPVIDAVHEHGGLAVV
AADLLALTLLEAPGTLGADVVVGSAQRFGVPLFYGGPHAGFMAVREGLERQLPGRLVGVS
VDAEGCPAYRLALQTREQHIRRDKATSNICTAQVLLAVTAGMYAVYHGPQGLKGIATQVN
ATASLLADRLRGAGVSVVHDAFFDTVLTEVPGRAAEVVAAAREREVHLRLVDADHVAISV
GETGGRAVDAVLAAFGAEPVGDGGWFVASALPGELERTTDYLTHPVFNTHHNETSMLRYL
ARLSNRDYALDRGMIPLGSCTMKLNATTEMEPISLAGFANLHPFVPAADADGYRQLIDQL
EGWLAEVTGYDRVSIQPNAGAQGEYAGMLAIRNYHRANGQGQRDICLIPSSAHGTNPASA
VMAGMKVVVVKANDDGTVDLDDLRAKCEQHSETLAAIMVTYPSTHGVYEETITELCDLVH
EHGGQVYIDGANFNALLGYAAPGRFGGDVSHLNLHKTFCIPHGGGGPGVGPVAVRAHLAP
YLPTHPLHPDAARREGTGAISAAPFGSAGILPISWAYIRMMGGAGLTRATAVAVLSANYV
AARLGEHFPVLYRGESGLVAHECILDLRGITAQTGVSVDDVAKRLIDYGFHAPTMSFPVA
GTLMVEPTESEDLAEVDRFCDAMIAIKGEIDRVAAGEWDVDASPLHHAPHTARTLVGDWD
RAYSREVAVFPAGITPDKYWPPVARIDQAYGDRNLVCACPPIDAYAD
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcatccgtcggccctgcccccttcgtccggcgccacatcggccccgacgacacc
caggtcgagaccatgctcgaccgcctcggctacgcgtccctcgacgccctgatggacgcc
gccgtgccgaagtcgatccgggccaccgacccgctggacctccccgccggcgtcgacgag
gagtcggccgccgccgagctccgggccctcgccggggccaacgtccccggtgagtccatg
atcggcctcggctaccacgccaccctcacccccgcggtgatccgccgcaacgtgctcgag
gacccgagctggtacaccgcctacacgccgtaccagccggagatctcgcagggccgcctc
gaggccctcatcaacttccagaccatggtcgccgacctggccggtctgcacaccgccggc
tcctccctgctcgacgagggcaccgccgcggccgaggccgtcgcgctggcgcaccgcgtc
aaccgcaaggcgcagggcccgttcgtcatcgacgccgacgcgctgccgcagaccatcgac
gtcgtccgcacccggtgcgagggcctcggcatcgagatcgtcgtcgccgacctcgcgggc
gggctgcccgcgggcccggtcgccggcgtgctggtccagtaccccggcgcgtccggccgg
gtcgccgacatcaagccggtcatcgacgccgtgcacgagcacggcggactggccgtcgtc
gccgccgacctgctcgccctgaccctgctggaggcgcccggcaccctcggcgccgacgtc
gtcgtcggctcggcccagcgcttcggcgtcccgctgttctacggcgggccgcacgccggc
ttcatggcggtgcgcgagggcctggagcgccagctcccgggccggctcgtcggcgtctcg
gtggacgccgagggttgcccggcgtaccgcctcgcgctgcagacccgcgagcagcacatc
cgccgcgacaaggcgacctcgaacatctgcaccgcccaggtgctgctcgccgtgaccgcc
ggcatgtacgccgtctaccacggcccccaggggctcaagggcatcgcgacccaggtcaac
gcgaccgcctcgctgctcgccgaccggctgcgcggcgcgggcgtgagcgtcgtccacgac
gccttcttcgacaccgtcctcaccgaggtgcccggccgggcggccgaggtcgtcgccgcc
gcgcgcgagcgtgaggtccacctgcgcctggtcgatgccgaccacgtcgcgatcagcgtg
ggggagaccggcggcagggctgtcgacgcggtgctcgcggcgttcggcgccgagccggtc
ggggacggcggctggttcgtggccagtgcgctgccgggcgagttggagcggaccaccgac
tacctgacccacccggtcttcaacacccaccacaacgagacctcgatgctgcgctacctc
gcgcggctctcgaaccgcgactacgccctggaccgcggcatgatcccgctcggctcctgc
accatgaagctcaacgcgaccaccgagatggagccgatctcgcttgccgggttcgccaac
ctccacccgttcgtgccggccgccgacgccgacggctaccggcagctgatcgaccagctc
gagggctggctcgccgaggtcaccggctacgaccgggtgtccatccagcccaacgccggc
gcgcagggcgagtacgccggcatgctcgccatccgcaactaccaccgggccaacggccag
ggacagcgcgacatctgtctgatcccgtcctccgcgcacggcaccaacccggcctcggcc
gtcatggccggcatgaaggtcgtcgtggtcaaggccaacgacgacggcaccgtcgacctc
gacgacctgcgggccaagtgcgagcagcactccgagaccctcgccgcgatcatggtgacc
tacccgtcgacgcacggcgtctacgaggagaccatcaccgagctgtgcgacctcgtccac
gagcacggcggccaggtctacatcgacggtgcgaacttcaacgcgctgctcggctacgcc
gcgcccggccggttcggtggcgacgtctcgcacctcaacctgcacaagacgttctgcatc
ccgcacggcggcggtggcccgggcgtcggcccggtcgcggtgcgcgcccacctcgcgccg
tacctcccgacgcatccgctgcaccccgacgccgcccggcgcgagggcaccggcgcgatc
agcgcggcgcccttcgggtccgcgggcatcctgccgatctcgtgggcctacatccggatg
atgggcggcgccggtctgacccgcgccaccgccgtcgcggtgctctcggccaactacgtc
gcggcccgtctgggcgagcacttcccggtgctctaccggggcgagtccgggctggtcgcc
cacgagtgcatcctcgacctgcgtggcatcaccgcgcagaccggcgtctccgtcgacgac
gtcgcgaagcggctcatcgactacggcttccacgcgccgaccatgtccttccccgtcgcc
ggcacgctcatggtcgagccgaccgagtccgaggacctcgccgaggtggaccggttctgc
gacgcgatgatcgcgatcaagggcgagatcgaccgggtggccgccggcgagtgggacgtc
gacgcgtcgccgctgcaccacgcgccgcacaccgcccgcaccctggtcggcgactgggac
cgggcctactcccgtgaggtcgcggtcttccccgccggcatcacccccgacaagtactgg
cccccggtcgcccggatcgaccaggcctacggcgaccgcaacctggtctgcgcctgcccg
ccgatcgacgcctacgccgactga
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