Nocardioides sp. L-11A: QJ852_16035
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Entry
QJ852_16035 CDS
T10892
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
nocd Nocardioides sp. L-11A
Pathway
nocd00470
D-Amino acid metabolism
nocd00550
Peptidoglycan biosynthesis
nocd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nocd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QJ852_16035 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QJ852_16035 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nocd01011
]
QJ852_16035 (murD)
Enzymes [BR:
nocd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
QJ852_16035 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
nocd01011
]
Precursor biosynthesis
Amino acid ligase
QJ852_16035 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
Motif
Other DBs
NCBI-ProteinID:
WGX94659
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All DBs
Position
complement(3338405..3339889)
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AA seq
494 aa
AA seq
DB search
MTDANRPDVTTLGRTDSWAGVRAVVAGFGTSGAAVVDNLLFLGADVHAVAESLSPRLRER
AELLESLGARIDAREGATAGLPGQADVLVVSPGFRPDAPIIVAARERGVPVWGEVELAWR
LRDPERPAPWLCVTGTNGKTTTVQMLDSILRAAGLRSVAAGNVGLPLTEAVMDPEPYDVI
AVELSSFQLHYTDSMSAESAVVLNVAEDHLDWYAGPSGMDDYARDKGRIYENVQRACVYN
VADPATERLVREADVIEGARAIGFTLGTPAAGMLGVVEDILVDRAFVEERATSAAELCTL
ADLASSAPHFVANALAAAALARAHGISQAAVRDGLRSFRPDGHRIAAVAEHDGITWVDDS
KATNPHAAASSLAAFEPVVWVAGGLAKGASFDDLVRAVGGRLRTAVLIGRDRPVIAEALS
RHAPDVPVIEVETPETGAVGELDLMRRVVAAAAGVAQPGDTVLLAPGCASMDQFTDYAAR
GDAFAAAVRDHVSG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgaaccggcccgatgtcaccaccctgggccgcaccgactcctgggcgggc
gtgcgtgccgtcgtcgccggcttcggcaccagcggcgccgcggtcgtcgacaacctgctc
ttcctgggcgccgacgtgcacgccgtcgccgagtcgctgagcccgcggctgcgcgagcgg
gccgagctgctggagagtctcggcgcccggatcgacgcgcgcgagggtgcgacggcgggc
ctgcccggccaggccgacgtcctcgtcgtctccccgggcttccgcccggacgcgccgatc
atcgtcgcggcccgggagcgcggcgtacccgtgtggggggaggtcgagctcgcctggcgg
ctgcgcgaccccgagcggcccgcgccctggctgtgcgtcaccggcaccaacggcaagacc
acgaccgtgcagatgctcgacagcatcctgcgggcggccggattgcgcagcgtcgcggcc
ggcaacgtcggcctgccgctgaccgaggccgtcatggaccccgagccgtacgacgtgatc
gccgtggagctgtcgagcttccagctccactacaccgactcgatgtcggcggagagcgcc
gtcgtgctcaacgtcgccgaggaccacctcgactggtacgccgggccgtccggcatggac
gactacgcccgcgacaaggggcggatctacgagaacgtccagcgtgcgtgcgtctacaac
gtcgcggatcccgccaccgagcggctggtccgcgaggccgatgtcatcgagggagcgcgg
gccatcggcttcaccctcggtacgccggcggcggggatgctcggcgtggtcgaggacatc
ctggtcgaccgtgcgttcgtcgaggagcgcgccacaagcgcggccgagctgtgcaccctc
gccgacctcgcctcgtcggcgccgcacttcgtcgccaacgccctcgccgctgccgcgctc
gcgcgcgcccacggcatcagccaggccgccgtacgcgacgggctgcggtccttccgcccg
gacggtcatcggatcgcggcggtcgccgagcacgacgggatcacctgggtcgacgactcc
aaggccaccaacccccacgcggcggcgtcctcactggcggcgttcgagccggtcgtgtgg
gtcgccggcggactcgccaagggggcctccttcgacgacctggtccgcgccgtcggcggc
cggctgcgcacggccgtcctgatcggccgggaccgaccggtgatcgcggaggcgctttcg
cgacacgcacccgatgtgcccgtgatcgaggtcgagacccccgagactggagccgtcgga
gagctcgacctgatgaggcgcgtcgtcgccgccgctgccggggtcgcccaaccgggcgac
acggtcctgctggcgccgggatgcgcctcgatggaccagttcaccgactacgccgcgcgg
ggcgacgccttcgccgcggcggtgcgggaccacgtcagcggctga
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