Nocardioides sp. L-11A: QJ852_16625
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Entry
QJ852_16625 CDS
T10892
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nocd Nocardioides sp. L-11A
Brite
KEGG Orthology (KO) [BR:
nocd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nocd03016
]
QJ852_16625 (truB)
Enzymes [BR:
nocd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QJ852_16625 (truB)
Transfer RNA biogenesis [BR:
nocd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QJ852_16625 (truB)
Prokaryotic type
QJ852_16625 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WGX94775
LinkDB
All DBs
Position
complement(3456128..3456997)
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AA seq
289 aa
AA seq
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MTASGVPSGLVVVDKPGGMTSHAVVSRVRRAMGTRKVGHAGTLDPMATGVLVLGVERATR
LLGHLMLTEKTYDATVRLGRSTSTDDAEGEVVADTPAGGLATAAVLAAFEEQVGDILQVP
TAVSAIKVDGKRAYQRVRDGEQVELTARPVTVHELTVHGQRVVGDWLDVDITVRCSSGTY
IRAIARDVGSALGVGGHLTALRRTAVGPFTLAQADTDLDRLTPIPLERAARDCFPALDLD
ADQAQAVRYGRPLPLRIDTLTGVFAPSGEFLALYRPEGGAARPAAVFVG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgtccggcgtgccgtcgggtctcgtcgtcgtcgacaagcccggaggcatgacc
tcgcacgccgtcgtgtcccgagtgcgccgggcgatgggcacccgcaaggtgggtcacgcc
ggcaccctcgacccgatggcgacgggcgtgctggtgctgggcgtcgagcgggccacccgg
ctgctcggtcacctgatgctcaccgagaagacctacgacgccacggtgcgcctcggcagg
tcgacgtcgaccgacgacgccgagggcgaggtcgtcgccgacaccccggcggggggcctg
gccacggcggcggtcctggccgccttcgaggagcaggtcggcgacatcctccaggtgccg
acggcggtcagcgcgatcaaggtcgacggcaagcgcgcctaccagcgggtccgcgacggc
gagcaggtcgagctcacggcccgtcccgtgaccgtccacgagctgacggtgcacggtcag
cgggtcgtgggcgactggctggacgtcgacatcacggtccgctgctccagcggcacctac
atccgggccatcgcccgcgacgtcggcagcgcgctcggggtcggcgggcacctgaccgcg
ctgcgccgtaccgcggtcgggccgttcaccctggcccaggccgacaccgacctcgaccgg
ctcacccccatcccgctcgagcgggccgcgcgtgactgcttccccgccctggatctcgac
gccgaccaggcccaggcggtccgctacggccggccgctgccgctgaggatcgacacgctc
accggcgtgttcgcgccgagcggcgagttcctcgcgctctaccgcccggagggcggagcc
gcccgtcccgcggccgtgttcgtcggctga
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