Nocardioides sp. L-11A: QJ852_17340
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Entry
QJ852_17340 CDS
T10892
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
nocd Nocardioides sp. L-11A
Brite
KEGG Orthology (KO) [BR:
nocd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nocd03021
]
QJ852_17340
Transcription machinery [BR:
nocd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QJ852_17340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_3
Sigma70_ECF
Cro
HNF-1_N
MarR
DUF722
HTH_24
DUF7343
MarR_2
Trp_repressor
HTH_10
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
WGX94917
LinkDB
All DBs
Position
3604033..3604851
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AA seq
272 aa
AA seq
DB search
MTTDLSRDGAESGAPTNIEVTRRRSAELFVVFRDEHASATERDVARESLVHLHLPLVEHC
ARRFRNRGEPYEDLVQVGTIGLIKSVDRFDTERGVEFSTYATPTIIGEIKRYFRDKGWAI
RVPRRLQELRMQISASTAELTQSLGRSPTPRELAEAIGCTVEEIIEGMESSNAYSTLSLD
ATDDDSDGGSGQSMLDAMGVDDAGLEHVEIRESVKPLLENLPPREKKILLLRFFKNMTQS
QIAEEIGVSQMHVSRLLSRTLTQLRDSLESES
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacctgtctcgggacggcgccgagagcggggcgccgacgaacatcgaggtg
acccgccgccgcagcgcggagctcttcgtggtgttccgcgacgagcacgcctcggcgacc
gagcgcgacgtggcacgcgagtccctcgtccacctgcacctgcccctcgtcgagcactgc
gcccgccggttccgcaaccggggcgagccctacgaggacctcgtccaggtcggcacgatc
ggcctgatcaagtccgtcgaccggttcgacaccgagcgcggcgtcgagttctcgacgtac
gcgacgccgacgatcatcggcgagatcaagcgctacttccgcgacaagggctgggcgatc
cgggtgccgcggcggctccaggagctgcgcatgcagatcagcgcgagcaccgccgagctg
acccagtcgctgggccgctcccccacgccgcgcgagctcgccgaggcgatcggctgcacc
gtcgaggagatcatcgaggggatggagtcgagcaacgcctactccacgctctccctcgac
gccaccgacgacgactccgacggcggcagcggccagagcatgctcgatgcgatgggcgtc
gacgacgccggtctcgagcacgtcgagatccgcgagtcggtcaagccgctgctcgagaac
ctgccaccgcgggagaagaagatcctgctgctgcggttcttcaagaacatgacccagtcg
cagatcgccgaggagatcggcgtctcccagatgcacgtctcgcggctgctcagccgcacc
ctgacccagctgcgcgactccctggagtcggagagctag
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