Nocardioides sp. L-11A: QJ852_17450
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Entry
QJ852_17450 CDS
T10892
Name
(GenBank) Ig-like domain-containing protein
Organism
nocd Nocardioides sp. L-11A
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
fn3
Cadherin_5
Pur_ac_phosph_N
Motif
Other DBs
NCBI-ProteinID:
WGX94939
LinkDB
All DBs
Position
complement(3624819..3630956)
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AA seq
2045 aa
AA seq
DB search
MSVLRKWRRTASATALALGLGTLVVLAYQHDGKPFTEVELNDGGVWVTNRDLGLVARLNP
QIKELDLGVESGSVEFDIFQRATSLYVDDASSDRAVKQVDIPHAAALEPTSLPSGAVVAN
GGSTFAVVDPVTGRAWVRAAERFRGFSAKATPPDLKGALRAAVGTDGRAYVLGRDGRVTP
YTLDEAGNAVAGDAMELGENVGTDPAMVALTVVGDTPVLFNRNSLELSRPGTDPVVVETA
DPSRLELQQPSGESDDVYVATVEGLQVAPVDGGELSDAGRGDVSGRPAAPVQMTNTGCVY
AAWSDATSPQNYLRDCPGTADDDTSPIPGMEEGADLRFRVNRDVVVLNDTRTGDSWLVQD
PGKAKIDNWPAVDPQNQNKSKLKETTEEVPDQENRAPVPQDDDLGARPGRSTVLPVVALN
DHDPDGDIISISKTQHVSGPELEVRIVGGGTQLQVAVPADATGLSTFYYYVTDGRVNEEV
RAEVRLQIRTDGSNERPRKMDDRDPRLRVAKGASSSYYLLADFYDMDGDDLTLTDATAPG
GEVEYRPDGTITFTDDGTGSPVSEIEYTIDDGVDSFVGKLAVDILDDAAPPELVPDLASG
VAGTQVVVQPLTNDRNPEGTDLTLKGVKVVGDDEGTKISKDLESGTFTFFSSRAKSYYLE
YTAYNSSATESSFIRLDIESPPKDNRPPVAVRDKAVITPGGTAQVDLLLNDLDPDGDVLV
VKRIGRPSIPGVKVSVVDKRLAVISSATDIVGQQATVDYVVSDGRSSAIGQLVVSQRRST
QENRHPVANKDQVTVRAGSVTTIPVLDNDSDPDGGKPRLFQSDLDPQNLDIWVAGDTLRL
RAPDEPGTYSAFYGVRDADGLKATAEVSVYVVADSAKNNHPPLPQPIIDRVIAGRPKVIS
VDLVGADPDGDSVTFRSILTAPSLGRVLDTGVDWIRYEAFEGKNGTDFFQILVQDKYGAT
GVAEVRVGVVPEETENQPPVALDDSVLVQPDRTISYNVLTNDVDPDDDPLRIAEINSTTP
AEHENGFIELDVGGAPDTGSQATNIGYTIEDAAGARDNAVLKVLASKDAPFYAPIARDDV
ADLGDIIGKEPGAEVEIPVLDNDLDFDGAKADLRVTACDAGSRGECEVVGEAAVRVRLKA
EDQVVLYSLDDADEESTGTFGVIYVTGTDNVPPQLTTDKDRVPVRAVAGEPVIFDLKDLV
VTRAGREPQIAPDSLASAVNGSVEPVEGEPTSLEFMPARDHVGPASVTVKVSDGRTAAED
AALTSLLTIPIDVKPSGNVAPVMRDAAVDVTVDGDPAEVDLAGLTRDANPDDLATMRWTV
QSAGQGLDARIGSDSSILSIEAGGGPKDGDALQVQVVADDGHGGQDEATVTVHVVDSDRP
LLQVPPITVPATKGKSMAVDLSDYAVNPYPGEPIEASNPRLEGNGLSDLEADGSVVTFTP
TATGTSTIKVTVADASGDRAREITARITVEVLDVPGTPQRPTLSSVEASSAVLTWREPEA
NGAAIDEYEVRGSQGFRQTCIPTTCRLVNLTPGESYTFTVVAHNSEGWGEESPPSEEIVP
NKAPDLMTPPVIVNESKPTGNRMDRQLTLRWTPPANEGSAITAYEIKEAGSSRTLQAPGN
ATSMVIPGLTNGTPYAFEIRAVNDVEPRRQYSGASKAVAPFGVPMRSGAPPQLTASEDSP
YNQQPWVRIDWSKWSDSQSNGNAVSSYTITCNGCSRPQYVVDASTSSKTFDPADGIRKGE
TFTFTVAATNDAGTSDRSPSVSGRPWTKAGPVRNLREIGDSTADKTATLAWEAPADDGGL
TIRHYVVQSNDGLSTTVNAAPGGGANFVFPTNGSHEVKVWAVAYNGNDAVPGQSSSVSGV
DTWGKPGIPEVDTLRSSEYYYVILDIEQGTANGRPVTGVQYSLDGTNWEDKSRFQQRVDQ
GDTSITIKARTVSDAPDDGRRYSDVKTFTGISRERELGITLNCSSDEADASCVVRVTGAG
FVDSHPVRVDLNGLSVVNTDNCPTFVTTQPGSFNYIAGGKTNCRVTGHGYATVTAGGISR
NTPAR
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgctccggaagtggcgcaggacggcgtccgcgacggcgctggccctcgggctc
ggcaccctcgtcgtgctggcctaccagcacgacggcaagccgttcacggaggtcgagctc
aatgacggcggggtctgggtcaccaaccgcgacctcggcctcgtggcccggctcaacccg
cagatcaaggagctcgacctcggcgtcgagtccgggagcgtcgagtttgacatctttcag
cgcgcgaccagcctgtacgtcgacgacgcgtcctcggaccgcgccgtcaagcaggtcgac
atcccccacgccgccgcgctggagcccaccagcctgccgagcggggccgtggtcgccaac
ggcggctccaccttcgccgtggtcgacccggtgaccggccgggcctgggtccgcgcggcc
gagcggttccgcggcttctccgccaaggccacgccgccggacctcaagggcgcgttgcgg
gcggccgtcggcaccgacgggcgggcctatgtcctggggcgcgacggtcgggtcacgccg
tacaccctcgacgaggcaggcaacgccgtggccggcgatgcgatggagctcggtgagaac
gtcggcaccgaccccgcgatggtggcgttgaccgtcgtcggcgacaccccggtgctcttc
aaccgcaacagcctcgagctgagccgtcccggcacggacccggtggtcgtcgagaccgcc
gatccctcccgcctcgagctccagcagccgtccggtgagagcgacgacgtgtacgtcgcg
accgtcgagggtctgcaggtcgccccggtcgacggcggcgagctgtccgacgccggccgc
ggcgacgtgtccggccgtccggcggcgccggtgcagatgaccaacaccggctgcgtgtac
gccgcctggtccgatgccacgtccccccaaaactacctgcgcgactgcccgggcaccgcc
gacgacgacacctcgccgatccccggcatggaggagggtgccgatctccggttccgggtc
aaccgcgacgtggtggtcctcaacgacacccgcaccggcgacagctggctggtccaggac
cccggcaaggcgaagatcgacaactggccggcggtggacccgcagaaccagaacaagtcg
aagctcaaggagaccaccgaggaggtccccgaccaggagaaccgcgctcccgttccccag
gacgacgacctcggcgcgcgtcccggccgctcgaccgtgctgcccgtcgtcgcgctcaac
gaccacgatcccgatggcgacatcatcagcatctccaagacccagcacgtcagcggtccg
gagctcgaggtgcggatcgtcggcggcggcacccagctccaggtcgcggtccccgccgac
gcgacggggctgtcgacgttctactactacgtcaccgacggtcgggtgaacgaggaggtc
cgggccgaggtccggctgcagatccgcaccgacggcagcaacgagcggccgcggaagatg
gacgaccgcgacccccggctccgggtcgccaagggcgcttcgtccagctactacctgctc
gccgacttctacgacatggacggcgacgacctcaccctgaccgacgccaccgcgcccggc
ggcgaggtcgagtaccggcccgacggcaccatcaccttcaccgacgacggcaccgggtcg
ccggtgagcgagatcgagtacaccatcgacgacggcgtcgacagcttcgtgggcaagctg
gcggtcgacatcctggacgacgcagcgccgcccgagctggtgccggacctcgcctcgggt
gtcgcgggcacgcaggtcgtggtccagccgctcaccaacgaccgcaaccccgagggcacc
gacctcacgctcaagggcgtgaaggtggtcggcgacgacgagggcacgaagatctccaag
gacctggagtccggcaccttcaccttcttctcgtcgagggcgaagagctactacctggag
tacaccgcctacaactcctcggccaccgagtcgtccttcatccgcctcgacatcgagtcg
ccgcccaaggacaaccggcccccggtcgccgtgcgcgacaaggccgtgatcaccccgggc
gggaccgcccaggtcgacctgctcctcaacgacctcgaccccgacggcgacgtcctggtc
gtcaagcgcatcggccggccgtcgatcccgggggtcaaggtgtcggtggtcgacaagagg
ctcgccgtcatcagctccgcgaccgacatcgtgggccagcaggcgacggtcgactacgtc
gtgtccgacggccgcagctccgccatcggccagctcgtcgtctcccagcgccgctccacc
caggagaaccggcacccggtcgccaacaaggaccaggtcacggtccgggcgggctcggtg
accacgatcccggtgctcgacaacgactccgatcccgacggcggcaagccgcggctgttc
cagtccgacctggacccgcagaacctcgacatctgggtggccggcgacacgctgcggctg
cgggcccccgacgagccgggcacctactcggcgttctacggcgtgcgcgacgccgacggg
ctcaaggccaccgccgaggtgagcgtctacgtcgtggccgactcggcgaagaacaaccat
ccacccctgccccagccgatcatcgaccgggtgatcgccggccgacccaaggtgatctcg
gtcgacctcgtcggggccgaccccgacggtgactcggtgaccttccgcagcatcctcacc
gcgccgtccctgggccgggtcctcgacaccggcgtcgactggatccgctacgaggcgttc
gagggcaagaacggcaccgacttcttccagatcctggtgcaggacaagtacggcgccacc
ggcgtcgccgaggtgcgcgtcggcgtcgtaccggaggagacggagaaccagcccccggtc
gcgctcgacgacagcgtcctcgtccagcccgaccgcacgatctcctacaacgtcctcacc
aacgacgtggaccccgacgacgaccccctgcgcatcgccgagatcaacagcaccacgccg
gccgagcacgagaacggcttcatcgagctcgacgtcggcggcgccccggacaccggctcc
caggcgaccaatatcggctacacgatcgaggacgccgccggggcccgggacaatgcggtg
ctcaaggtgctggcgagcaaggacgcgcccttctacgcgcccatcgcccgcgacgacgtg
gccgacctgggcgacatcatcggcaaggagcccggcgccgaggtcgagatcccggtgctc
gacaacgacctcgacttcgacggtgcgaaggccgacctgcgcgtgaccgcctgcgacgcc
ggcagccggggcgagtgcgaggtcgtcggcgaggccgccgtccgggtccggctcaaggcc
gaggaccaggtcgtgctctacagcctcgacgacgccgacgaggagtcgacgggcaccttc
ggcgtcatctacgtcaccggcaccgacaacgtgccgccgcagctgaccaccgacaaggac
cgggtcccggtgcgggccgtggcgggcgagccggtgatcttcgacctcaaggacctcgtg
gtcacccgggccggccgggagccgcagatcgcgcccgactccttggccagtgctgtcaac
ggcagtgtggagcccgtggagggcgagcccacctcgctcgagttcatgccggcccgcgac
cacgtcggccccgcgtcggtgaccgtcaaggtgagcgacggccggacggccgccgaggac
gccgcgctgacgtccctgctgacgatcccgatcgacgtgaagccctcgggcaatgtcgcg
ccggtgatgcgcgacgccgcggtcgacgtcacggtcgacggcgatcccgcggaggtcgac
ctcgccgggctcacccgcgacgccaaccccgacgacctggccaccatgcggtggacggtg
cagtccgcgggccagggcctggacgcgcggatcgggtccgacagcagcatcctgtcgatc
gaggccggcggcggcccgaaggacggtgacgcgctgcaggtccaggtcgtcgccgacgac
ggccacggcgggcaggacgaggcgacggtcaccgtccacgtcgtcgacagcgaccgcccg
ctgctccaggtcccgccgatcacggtgccggcgacgaagggcaagtcgatggcggtcgac
ctgtccgactacgccgtcaacccgtaccccggtgagccgatcgaggccagcaacccgcgc
ctcgagggcaacgggctgtccgatctcgaggccgacggctccgtggtcaccttcacgccc
accgcgaccgggacgtcgaccatcaaggtgaccgtcgccgacgcctccggtgaccgggcc
cgcgagatcaccgcccggatcaccgtcgaggtgctcgacgtgcccggtacgccgcagcga
ccgaccctctcctcggtcgaggcgtcctccgccgtgctcacctggcgggagcccgaggcc
aacggcgccgccatcgacgagtacgaggtccgcggctcccagggcttccgacagacctgc
atcccgaccacctgccggttggtcaacctcacgccgggggagtcctacaccttcacggtg
gtggcccacaacagcgaggggtggggcgaggagagcccgccgtcggaggagatcgtcccc
aacaaggcccccgacctgatgacgccgcccgtcatcgtcaacgagtccaagccgaccggc
aaccggatggaccgccagctcaccctgcgctggaccccaccggccaacgagggctcggcg
atcacggcctacgagatcaaggaggccggcagcagccggaccctgcaggcgccgggcaat
gcgacctcgatggtcatccccggcctgaccaacggcacgccgtacgccttcgagatccgt
gcggtcaacgacgtcgagccgcgccggcagtattccggggcgtcgaaggcggtcgccccg
ttcggcgtcccgatgcgctccggcgccccgccccagctgaccgcgagcgaggacagtccc
tacaaccagcagccgtgggtgcgcatcgactggtcgaagtggtcggactcgcagagcaac
ggcaacgccgtcagcagctacacgatcacgtgcaacggctgttcgcggccgcagtacgtc
gtggacgcctcgacgtcgtccaagaccttcgacccggccgacggcatccggaagggcgag
acgttcaccttcacggtggcggccaccaacgacgccggcacgagcgaccgcagcccgagc
gtctcgggccggccgtggaccaaggcgggcccggtgcgcaacctgcgcgagatcggcgac
tcgacggccgacaagacggccactctcgcctgggaagcgccggccgacgacggggggctc
acgatccgccactacgtcgtccagtcgaacgacgggctgtccacgacggtgaacgccgcc
cccggcggcggtgccaacttcgtcttcccgaccaacggcagccacgaggtcaaggtctgg
gcggtcgcctacaacggcaacgacgcggtccccggccagtccagctcggtgtcgggcgtc
gacacctggggcaagccgggcatccccgaggtcgacacgctgcgcagcagcgagtactac
tacgtcatcttggacatcgagcagggcacggccaacggcaggcccgtcaccggcgtgcag
tacagcctcgacgggacgaactgggaggacaagtcccggttccagcagcgcgtcgaccag
ggcgacacctcgatcaccatcaaggcccggacggtctccgacgcgccggacgacggccgc
cgctacagcgacgtcaagaccttcacgggcatctccagggagcgcgagctggggatcacc
ctgaactgctcgagcgacgaggccgacgcgtcgtgcgtggtgcgggtgaccggcgccggg
ttcgtcgactcccatcccgtccgggtcgacctcaacgggctgagcgtcgtcaacaccgac
aactgcccgaccttcgtcaccacccagcccggctcgttcaactacatcgcgggcggcaag
accaactgccgggtcaccggccacggctacgccacggtgaccgccggcggcatcagccgc
aacaccccggcgcgctga
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