Nocardioides sp. L-11A: QJ852_18460
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Entry
QJ852_18460 CDS
T10892
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nocd Nocardioides sp. L-11A
Pathway
nocd03420
Nucleotide excision repair
nocd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nocd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QJ852_18460
03430 Mismatch repair
QJ852_18460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocd03400
]
QJ852_18460
Enzymes [BR:
nocd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QJ852_18460
DNA repair and recombination proteins [BR:
nocd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QJ852_18460
MMR (mismatch excision repair)
Other MMR factors
QJ852_18460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WGX95133
LinkDB
All DBs
Position
complement(3823841..3827122)
Genome browser
AA seq
1093 aa
AA seq
DB search
MTAATAARIPMAIETPADLQRAMKAPFPPSEEQWAAISAPLRPAVVIAGAGSGKTTLMAA
RVVYLVLTGQVRPEEVLGLTFTTKAAAELRQRIRTALRDAGALDEVGAPGGPGGPGAGDE
TDEVLEPTVATYNAYASGLLTDHGLRIGHEPDTRVITDAARYQLGARAVDRFTGQIDLLT
DHPETAIQNLLALDAAMSEHLVTPERVLEHDAAARRGFERAREEELAGKARKTYVDAGDK
AINAIDRRAELLQLVAAYRRLKRDLGLMDFSDQIELGARLAAERPEVGAVERGRFKVVLL
DEYQDTSVAQAIMLSRLFSGPDPDTGLGHAVTAVGDPNQAIYGWRGASVANILNFATTFP
AVDGTSTTYALTVNRRSDRRILAVASRLAEPLYDALELRGAGVARLRAPDGATAGVVEAL
TFETQRDELAWLAEAVRGAYGGDPGDWAGIGVLTRDNAHAELVFDALTTAGIPVEIVGLS
GLLRLPEIAEIVAVLRLLHDVTDNAALLTLLAGPRWAIGPRDLRLLGQRAGELAGRRGRA
VEQVSVAEQLVAIADGIDPAEIPCLDDALADPGEAAYSDEARSRFGLLRDELRLLRSAVG
EPLLDLVRRIVDVTGADVELASAVSPAAAARRDNLDLFVKAVADFQAVDGDVSLPALLAY
LTAEDDQGNGLDVATPTEADSVKLLTVHRSKGLEWDTVFCVGVCESRFPSAQGRTLWMSS
PAVLPAPLRGDAGDLPQLEGFDKAALDDYRRRSKAHEADEELRLGYVAFTRAAHRLTVSS
YQWGPRKTPYGPSSFQESVRETLTSWDLAPEPWLTRPEKGAANPYDAEDPSRPWPVDGMG
EEARRRLDAAARVAAADPSAPDPGLDIVTAARVAEWDAEIEQLLAEARLASTAGSEVVVP
LPSSLSATALSRLRDDPEAFARELARPMPRPPAPAARFGTRFHAWVEARFGQQGLFDPDE
LAGRADAGIDDEADLKELVARFEEGPFGSREPHAVEAPFALVLGTDGGARQVVRGRIDAV
YAEPDGSFLVVDWKTGARHGADPLQLALYRLAWAELEGIDPDRVRAGFFYVRTGELVEPD
GLPGREEVEALLR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgcgaccgccgcccggatcccgatggcgatcgagacccccgccgacctgcag
cgggcgatgaaggcgcccttcccgccgagcgaggagcagtgggccgcgatcagtgcgccg
ctgcgccccgccgtcgtcatcgccggggcggggtcgggcaagaccacgctgatggccgcc
cgggtcgtctacctcgtgctcaccggccaggtccggcccgaggaggtgctcggcctgacc
ttcacgaccaaggccgccgccgagctgcggcagcggatccggacggcgctgcgcgacgcc
ggcgcgctcgacgaggtcggtgctcccggcggtcctggcgggcccggcgccggcgacgag
accgacgaggtgctcgagccgaccgtcgcgacctacaacgcctacgcctccggtctgctc
accgaccacggcctgcggatcgggcacgagcccgacacccgggtgatcaccgacgccgcg
cgctaccagctcggcgcgcgggccgtcgaccggttcaccggtcagatcgacctgctgacc
gaccacccggagaccgcgatccagaacctgctcgccctcgacgcggcgatgagcgagcac
ctggtcacccccgagcgggtgctcgagcacgacgccgcggcacggcgcggcttcgagcgg
gcgcgtgaggaggagttggccggcaaggcgcgcaagacctacgtcgatgccggcgacaag
gcgatcaacgcgatcgatcggcgtgccgagctgctgcagctcgtggcggcgtaccgacgg
ctcaagcgcgacctgggcctgatggacttctccgaccagatcgagctcggcgcccggctc
gccgccgagcggcccgaggtcggcgccgtcgagcgcgggaggttcaaggtggtgctgctc
gacgaataccaggacacctccgtcgcccaggcgatcatgctctcccggctgttctccggc
cccgatcccgacaccgggctcggccacgcggtgacggcggtcggcgaccccaaccaggcg
atctacggctggcgcggcgcgtcggtcgccaacatcctcaacttcgccaccaccttcccg
gcggtcgacggcacctccacgacctacgcgctgaccgtcaaccggcgctccgaccgccgg
atcctcgcggtcgccagccggctcgccgagccgctctacgacgccctggagctgcgtggc
gcgggtgtggcgcggctgcgggcgcccgacggcgcgaccgccggcgtggtcgaggcactc
accttcgagacacagcgcgacgagctcgcctggttggccgaggcggtgcgcggggcctac
ggcggcgacccgggcgactgggccggcatcggcgtgctcacccgcgacaacgcgcacgcc
gagctggtcttcgacgcgctgaccacggcaggcatccccgtcgagatcgtcggcctctcc
gggctgctgcggctgcccgagatcgccgagatcgtggcagtgctgcggctgttgcacgac
gtcaccgacaacgccgccctgctgaccctgctcgccgggccacgctgggcgatcgggccg
cgcgacctgcgtctgctcggtcaacgtgccggcgagctggcgggccgccgcggccgggcg
gtcgagcaggtgtccgtggccgagcagctcgtcgcgatcgccgacggcatcgaccctgcc
gagatcccgtgcctcgacgacgcgctggccgatccgggggaggcggcctactccgacgag
gcccggtcgcggttcgggctgctgcgcgacgagctgcgcctgctgcgctcggccgtgggg
gagccgctgctcgacctggtccgccggatcgtcgacgtcaccggtgccgacgtggagctc
gcctcggcggtgagcccggccgccgctgcccgccgcgacaacctcgacctgttcgtcaag
gcggtcgccgacttccaggccgtcgacggcgacgtctccctgccggccctgctcgcctat
ctcaccgccgaggacgaccagggcaacggcctcgacgtcgcgacgccgaccgaggccgac
tccgtcaagctgctcaccgtgcaccgctccaaggggctggagtgggacaccgtgttctgt
gtcggagtctgcgagtcccgcttcccctccgcgcagggacggacgctgtggatgtcgtcc
ccggcggtgctgccggcgccgctgcgcggcgacgcgggcgacctcccccagctcgagggc
ttcgacaaggccgcgctcgacgactaccggcggcgttcgaaggcgcacgaggccgacgag
gaactgcggctcggctacgtcgccttcacccgcgcggcccaccggctcacggtgtcgtcc
taccagtggggaccgaggaagacgccctacggtccctcgtccttccaggagtcggtgcgc
gagacgctcacctcctgggacctggcccccgagccgtggctcacccggcctgagaaggga
gcggccaacccctatgacgccgaggacccgtcgcggccctggccggtcgatggcatggga
gaggaggcgcggcgccgcctcgacgcggcggcccgggtggctgcggccgacccgtccgcg
cccgatcccggactcgacatcgtcacggcggcccgggtcgcggagtgggatgccgagatc
gagcagctcctcgccgaggcccgtctcgcgtcgacggccggcagtgaggtcgtcgtcccg
cttccgtcgtcgctctcggccaccgcgctgagccggttgcgcgatgacccggaggccttc
gcccgtgagctggcgcggccgatgccgcgcccgcccgctccggccgcgcggttcgggacc
cgcttccacgcgtgggtcgaggcccggttcggccagcagggcctcttcgaccccgacgag
ctcgccggccgcgccgacgccggcatcgacgacgaggcggacctcaaggagctggtggcc
cgcttcgaggaggggcccttcggcagccgcgagccgcacgcggtcgaggccccgttcgcc
ctcgtcctcggcacggacggcggcgcacgtcaggtcgttcgagggcggatcgacgctgtc
tacgccgagcccgacggctccttcctcgtggtcgactggaagaccggggcccggcacggc
gccgatccgctgcagctcgcgctctaccggctggcgtgggcggagctcgagggcatcgat
cccgatcgggttcgggcgggcttcttctacgtccgcaccggcgagctcgtggagcccgac
ggactgccgggccgcgaggaggtggaggccctgctgcgctga
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