Nocardioides sp. L-11A: QJ852_23020
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Entry
QJ852_23020 CDS
T10892
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nocd Nocardioides sp. L-11A
Pathway
nocd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nocd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QJ852_23020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nocd02000
]
QJ852_23020
Transporters [BR:
nocd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
QJ852_23020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
ComX
Motif
Other DBs
NCBI-ProteinID:
WGX96010
LinkDB
All DBs
Position
complement(4803700..4805214)
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AA seq
504 aa
AA seq
DB search
MTLAAVATVAAACAGSDGAGGGDDDTVTMGNLYGFVTFDPALTPPPALDYLSPVYDSLVV
RKGIDTFEPGLATEWEYDGKARTLRLVLRAGVVFTDGAPFDAEAVAKNFEHGKTATSGSW
FDVYNAMEAIEVVSDKELVITFSSAQPAIVETLAAPPGMMVSPRALEDPDSLGTTPVGTG
PWRLDAERTVANDSYVFVRNEDYWDPAVQRVDRVVIKPLVEPSTMVNALKAGQVDVIGIT
GGEAKSLEGQGYVVGSMGAAMEVLVLADGRGEVSKPLADVDVRRALGYSLDRPSILDATF
GGRGTSSVNPFEEGSVGYSERLDGAYDRDVEQARALLAGAGYPDGFTVETYITPAHSLIA
EAVAGQLADIGVELKVNVVENAGALSDRIAKKQSPVLVNATGIRSAYEFYTAFAGPGGRY
NPFGSTSPRLEELAAEVRQLGTNDRAEATRVYGELFDELIYGEALVIPVFRQELPVVMRK
GVEAELDTYAGTIPNPRNLTIDGE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctcgccgccgtcgcgaccgtcgctgccgcgtgcgccggctccgacggcgcgggc
ggtggcgacgacgacaccgtcacgatgggcaacctctacggtttcgtcaccttcgacccg
gcattgacgccgccgccggcgctcgactacctctcgccggtctatgacagcctcgtggtc
cgcaagggcatcgacaccttcgagccgggcctcgcgacggagtgggagtacgacggcaag
gccaggacgctgcgcctggtcctgcgtgccggcgtggtgttcaccgatggcgctccgttc
gacgcggaggcggtggccaagaacttcgagcatggcaagacggcgacctccggtagctgg
tttgatgtatacaatgccatggaagcaatcgaggtggtgtctgacaaggagctggtgatc
accttctcgtcggcgcagcccgcgatcgtcgagaccctcgccgccccaccggggatgatg
gtgagcccacgcgcgctcgaggaccccgactcgctgggcaccacgccggtcggcaccggg
ccgtggcggctggacgccgagcggaccgtcgccaacgactcctacgtgttcgtgaggaac
gaggactactgggacccggcggtccagcgggtcgaccgggtcgtcatcaagccgctggtc
gagccgtcgaccatggtcaacgcgctgaaggccgggcaggtcgacgtcatcgggatcacc
ggcggggaggccaagtccctcgagggacagggctacgtcgtgggatcgatgggagccgcg
atggaggtgctcgtcctggcggacggccgcggcgaggtgagcaagccgctcgccgacgtc
gacgtgcgccgggccctgggctactccctcgaccgtccttcgatcctcgacgccaccttc
ggcggccgggggacctcgagcgtcaaccccttcgaggaagggtccgtcggctacagcgag
cggctggacggtgcctacgaccgggacgtcgagcaggccagagccctgctcgccggggcc
ggatatcccgacggcttcaccgtcgagacctacatcaccccggcccacagcctgatcgcc
gaggccgtcgcgggccagctggccgacatcggcgtggagctcaaggtgaacgtcgtggag
aacgccggggcgctgagcgaccggatcgccaagaagcagtcgcccgtcctggtcaacgcg
accgggatccgcagcgcctacgagttctacacggccttcgccggtcccggcggccggtac
aacccgttcggcagcaccagtccgaggctcgaggaactggccgccgaggtccgccagctc
ggcaccaacgaccgcgccgaggcgacccgggtctacggcgagctcttcgacgagctcatc
tacggcgaggcgctcgtcatcccggtcttccggcaggagctgcccgtcgtgatgcgcaag
ggcgtcgaggccgagctggacacctacgccggaaccatccccaatccccgcaacctgacg
atcgacggagagtag
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