Nocardioides sp. L-11A: QJ852_24385
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Entry
QJ852_24385 CDS
T10892
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nocd Nocardioides sp. L-11A
Pathway
nocd03030
DNA replication
nocd03430
Mismatch repair
nocd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nocd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QJ852_24385
03430 Mismatch repair
QJ852_24385
03440 Homologous recombination
QJ852_24385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocd03032
]
QJ852_24385
03400 DNA repair and recombination proteins [BR:
nocd03400
]
QJ852_24385
Enzymes [BR:
nocd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QJ852_24385
DNA replication proteins [BR:
nocd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QJ852_24385
DNA repair and recombination proteins [BR:
nocd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QJ852_24385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
Rad17
AAA_14
Mg_chelatase
AAA_18
AAA_5
AAA_16
AAA_19
TsaE
nSTAND3
AAA_28
zf-CXXC
RNA_helicase
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
WGX96272
LinkDB
All DBs
Position
complement(5094063..5096285)
Genome browser
AA seq
740 aa
AA seq
DB search
MDSPLALYRRYRPETFAEVIGQEHVTEPLRAALAGNRVNHAYLFSGPRGCGKTTSARILA
RALNCEKAPISDPCGECESCRDLARNGPGSIDVIEIDAASHGGVDDARDLREKAFFAPVK
SRYKVYIIDEAHMVTTQGFNALLKLVEEPPPHLRFIFATTEPEKVIPTIRSRTHHYPFRL
IPPRLLTSYLTELCEREGVSIEPAALPLVVRAGAGSARDTLSVLDQLLGGAGPQGVTYDL
ASGLLGYTPDTLLDDVVSAFAAGDGSAVFGVVDKVIETGQDPRRFTEDLLRRLRDLVIIS
AVPDAAASGLLDLSGDQADRLVAQAAAFGRAELTRAADLVAAGLTDMRGATAPRLLLELI
CARILLPAADHTTEGVLARLDRLERRASISGTTSAESAPAAAPAVVPAQDRPVPSRAERA
APERVEDPAPAPAPAPAPTPPPTPAPAPTPVVEATPEPAHAPEPEPVPEPVAQQPPPSVS
VAAAAEPAAAGPEQAGGSAGSSAGGSGLSLVDVRRLWPSVIDRVKGVKRVTWIHLTQNSQ
VVGFNGKVLSLGFQTDGPRRSFESGGHAEIVQQAVIDEIGADVRVEAIVDPAADPGARTP
EPAAASAPATQAAASVPAAPATPAAPAPAAAESGGWPEVTAPPSSAVPSSSTGPSAPPPD
DPPPWATEPPPADGPPEEPVSRRSRVADIQAQADAAAEAPPEDPDAAVDLNDREVDAESS
AELLARELGAQMIEEIPRGD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtggactccccgctcgcgctctatcgccgctaccggcccgagaccttcgccgaggtcatc
gggcaggagcacgtcaccgagccgctgcgggccgcgctggccggcaaccgggtcaaccat
gcctacctcttctccggtccccgcggctgcggcaagacgacgagtgcgcggatcctcgcc
cgcgcgctcaactgcgagaaggcgccgatctccgatccgtgtggggagtgcgagagctgc
cgcgacctggcgcgcaacgggccgggctcgatcgacgtgatcgagatcgacgccgcctcc
cacggcggcgtcgacgacgcccgcgacctgcgcgagaaggccttcttcgcgccggtgaag
agccgctacaaggtctacatcatcgacgaggcccacatggtcaccacgcagggcttcaac
gccctgctcaagctggtcgaggagccgccgccccatctgcggttcatcttcgccacgacc
gagccggagaaggtcatcccgaccatccgctcgcgcacccatcactacccgttccggctg
atcccgccgcggctgctgacgtcgtacctcaccgagctgtgcgagcgcgagggtgtctcc
atcgagccggcggcgctgccgctcgtcgtgcgggccggcgcgggctcggcccgcgacacg
ctctcggtgctcgaccagctgctcggcggggcgggcccgcagggcgtgacctacgacctg
gcgagcggcctgctcggctacacccccgacacgctgctcgacgacgtcgtgtccgccttc
gccgccggcgacggctcggcggtcttcggtgtggtcgacaaggtgatcgagaccgggcag
gatccccgccggttcaccgaggacctgctccgccggctgcgcgacctcgtcatcatctcc
gccgtccccgacgctgcggcctccggtctgctcgacctctccggcgaccaggccgaccgc
ctcgtcgcgcaggccgccgccttcggccgggctgagctgacccgcgccgccgacctggtc
gcggccggtctcaccgacatgcgcggcgccaccgcgccccggctgctgctcgagctgatc
tgcgcccggatcctgctccccgccgccgaccacaccaccgagggcgtgctcgcccgcctc
gaccggctcgagcgccgcgcctcgatcagcggtacgacgtccgcggagtccgcacccgca
gccgctccggccgtcgtcccggcccaggaccggccggtgccgtcgcgggccgagcgggcg
gcgccggagcgggtcgaggacccggctcccgccccggctcccgccccggcacccacgccg
ccgcccactccggctccggcgcccacgccggtggtcgaggcgacgcccgagccggcccat
gcacccgagcccgagccggttcccgagcccgtcgcgcagcagcccccgccgtcggtgtcg
gtcgctgccgccgcggagccggccgcggccggtccggagcaggccgggggcagtgccggg
agcagcgccggcggcagcggcctgagcctggtcgacgtccgccggctgtggccctccgtc
atcgaccgggtcaagggggtcaagcgggtcacctggatccacctcacccagaactcccag
gtcgtcggcttcaacggcaaggtgctcagcctcggcttccagaccgacggcccgcgccgc
tccttcgagtcgggcgggcacgccgagatcgtccagcaggcagtgatcgacgagatcggt
gccgacgtgcgggtcgaggcgatcgtcgaccccgccgccgacccgggggcacgcaccccg
gagccggccgccgcttctgccccggccacccaggccgccgcttctgtcccggccgccccg
gccaccccggccgccccggccccggcggcggccgagtccggtggctggccggaggtcacc
gcgccgccctcctccgccgtcccgtcctcctccaccggaccgtccgcaccgcccccggac
gacccgccgccgtgggccaccgagcccccgccggccgacggaccgcccgaggagccggtg
tcgcgtcgctcgcgggtggccgacatccaggcgcaggccgatgccgccgcggaggcgccg
ccggaggaccccgacgccgccgtcgacctcaacgaccgtgaggtcgacgccgagtccagc
gccgagctcctcgcccgcgagctgggcgcccagatgatcgaggagatcccccgcggcgac
tga
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