KEGG   Nocardioides sp. L-11A: QJ852_24540
Entry
QJ852_24540       CDS       T10892                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
nocd  Nocardioides sp. L-11A
Brite
KEGG Orthology (KO) [BR:nocd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nocd03032]
    QJ852_24540
   03036 Chromosome and associated proteins [BR:nocd03036]
    QJ852_24540
   03400 DNA repair and recombination proteins [BR:nocd03400]
    QJ852_24540
DNA replication proteins [BR:nocd03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    QJ852_24540
Chromosome and associated proteins [BR:nocd03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    QJ852_24540
DNA repair and recombination proteins [BR:nocd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      QJ852_24540
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_bac_2 HU-HIG
Other DBs
NCBI-ProteinID: WGX96301
LinkDB
Position
5125281..5125574
AA seq 97 aa
MNRTDLTAAVAGATGLTPPRAAAAVAATLDAIVRGVDEHGSVTLAGFGTFERRSRAARTG
RHPRTGEPMEIPASVTPAFRAAAAFRRRVADGSSAEN
NT seq 294 nt   +upstreamnt  +downstreamnt
atgaaccgcaccgacctgaccgccgccgtcgccggggcgaccggcctcacgcccccacgg
gcggccgccgccgtcgcggcgaccctcgacgcgatcgtgcgcggggtcgacgagcacggg
agcgtgacgctcgccggcttcgggaccttcgagcgacgcagccgcgcggcgcgcaccggg
cgccacccgcgcaccggcgagccgatggagatccccgcgagcgtcacgccggccttcagg
gccgccgcggcgttccggcggcgggtcgccgacgggagttccgccgaaaactag

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