KEGG   Nocardioides sp. L-11A: QJ852_25740
Entry
QJ852_25740       CDS       T10892                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
nocd  Nocardioides sp. L-11A
Brite
KEGG Orthology (KO) [BR:nocd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nocd02048]
    QJ852_25740 (cas8c)
Prokaryotic defense system [BR:nocd02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    QJ852_25740 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: WGX96535
LinkDB
Position
5378893..5380698
AA seq 601 aa
MLLRALNEYGGAGGRTPAGYAMKTLGFVLQIDSDGEGCQLHSRYERLETPDGKSRAVAGS
ALIPNVVRTVKPVPMLGCDNASYVLGRPKAEKDPAKQEKEAAKAGVKCAAFDALLREYAE
TAGDDDALVFLRWRGNGEPGLERAIAALDSFSIGRLDLDPIAIQVGASSQIHSKPSAQSF
WSARATSSKSRGEPRICLVCGRLKPVVDTLPQSLTGALIPATSTSNVALVSVNFPAASRG
ASGTGLRSAPICADCATGAVSAFNTLAASPDHRWGGRNEAQATIWWTEDGSVDFNTLEAP
EPREVAAFLTALDRGHRPIGEFEDADHFYALTFSGNVARLVIRQWIDLPLLEAHRNVVAW
FDDSAGPVPGRANFGVSEMARSCGDFVPSDGLFSGLPEGSRELLITCALTGAKIPRNLFT
RAIGRARAETHYLSLSDARAVGVVRRRMHARFALIRLILNRSHLKGKPLPPHLDEDRSEP
SYLSGRLFAVRESLQYQALGEVNASITDRYFERASANPASVDHALSTLEQQHLRALRRKG
RRDAEIAFSKRVDDLHARCGAAPGRLTSEEQALWIAGYYQQRQANFQRAQENKQQTTSEE
N
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgctccttcgcgcgttgaacgaatacggcggagccggcgggcgcacgccggcgggctat
gcgatgaagaccctcggcttcgtcctccagatcgactcggacggcgagggctgccagttg
cactcgcgctacgagcgcctcgagacgcctgacggaaagtcacgggccgtggctggatcc
gccctgatcccgaatgtcgttcggacggtcaagccggtgcccatgctcggatgcgacaac
gcgagctatgtgctcggtcgccccaaagctgagaaggatcctgccaagcaggagaaggag
gccgcgaaggcaggcgtcaagtgcgcggctttcgacgccctgcttcgggaatacgcggaa
acggccggtgacgacgacgcgctggtcttcctccgttggcgcggcaatggcgaaccaggg
ctggagagggcgattgccgctctggactcattcagtatcggccgtctggatctcgatccg
atcgcgatccaagtgggcgcgtcatcgcagatccactcgaagccgtccgctcagagtttc
tggagcgcgcgcgcaacatcgtccaaatcccgcggcgagccacgcatctgcctcgtctgc
ggccggctcaagccagtcgtcgacacgcttccgcaatccctgaccggggcgctcatccct
gccacgtcgacctccaacgtggccctggtgagcgtcaacttcccggcggcttctcgcggc
gcaagcggcactgggctccggtcggcgccgatctgtgcggactgcgcgaccggtgccgtc
tcggccttcaacacgctcgccgcctcgccagatcaccgctggggcgggcggaacgaggca
caggcgacgatctggtggaccgaggatggttcggtcgacttcaataccctggaagcgcca
gagcctcgcgaggtcgccgcatttctcacggccctcgacagagggcacagacccatcggc
gagttcgaggatgcagaccacttctacgccctgacgttctcaggcaacgtggctcggctc
gtgatccgtcagtggatcgacctcccgttgctggaagcccaccggaacgtagtcgcatgg
ttcgacgacagcgccggaccagtgcccggcagagccaattttggcgtatcggagatggct
aggagctgcggtgacttcgttccctccgacggcttgttctcgggcttgccagagggctcc
cgtgaactgctgatcacgtgcgcgctgaccggggcgaagatcccacgaaacctgttcacc
cgggccatcggtcgagcgcgggcggagacccactatctgtcgctctccgacgcgcgagct
gttggcgtcgtacggcgacgcatgcatgcccgcttcgctctgatccgcctcatcctcaac
cgctctcacctgaaggggaagccattgccaccacatctcgatgaggacagaagcgagccg
tcctatctctccgggcgcctcttcgccgtccgggagtcgctccagtaccaggcattgggc
gaagtgaacgcgtcgatcaccgaccgttacttcgagcgggcgtcagcgaacccggcaagt
gtcgatcacgcgctctcaaccctggaacaacagcaccttcgtgctctccggaggaaggga
cgacgtgacgccgagatcgccttcagcaagcgtgtcgacgatctccatgccagatgcggg
gcggctcccggtcggctgacgagcgaggagcaggccctctggatcgccggctactaccag
cagcgtcaggcgaacttccagcgggcgcaagagaacaagcagcagaccacctccgaggag
aactga

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