Neobacillus oceani: V1499_01210
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Entry
V1499_01210 CDS
T11220
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
noce Neobacillus oceani
Pathway
noce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
noce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V1499_01210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
noce03019
]
V1499_01210
03009 Ribosome biogenesis [BR:
noce03009
]
V1499_01210
Enzymes [BR:
noce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
V1499_01210
Messenger RNA biogenesis [BR:
noce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V1499_01210
Ribosome biogenesis [BR:
noce03009
]
Prokaryotic type
rRNA helicases
V1499_01210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
XOL53318
LinkDB
All DBs
Position
220043..221458
Genome browser
AA seq
471 aa
AA seq
DB search
MGFEEATPIQAETIPLSLENKDLIGQAQTGTGKTAAFGIPLVEKINPSNHAIQGIIIAPT
RELAIQVSEELYKIGAGKRIQVLPIYGGQDISRQIRSLKKGPHIIVGTPGRILDHINRKT
MRLDQVHTAILDEADEMLNMGFIEDIEAILAEIPAERQTLLFSATMPAPIQRMAEKFMKD
PQIVRVKAKEMTVPSIEQYYLEVQEKNKFDVLTRLLDIQSPELAIVFGRTKRRVDELAEA
LTLRGYTAEGIHGDLTQAKRISVLRKFKEGSIDVLVATDVAARGLDISGVTHVYNFDIPQ
DPESYVHRIGRTGRAGKTGVALTFITPREKSYLAVVERTTKRKMERMKPPTLDEALEGQQ
KAVVERIEQTIESNNLQYYKAAAAELLENHDASTVVAAVLKMLTKEPDQTPVKLTEEAPL
PQRRDRDRKPFNRGGRGDSKGGYDRRKGSGRYGEKRPYEKRTGGKPRSYNK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgaagaagcaacgcccatccaggcggaaaccattccgttgagcctggaaaac
aaggaccttatcgggcaggcccaaacgggaacagggaaaaccgctgctttcggtattcct
ctcgttgaaaaaatcaacccttccaaccatgccatccagggtatcattattgccccaacc
cgtgagcttgccatccaggtgtccgaggagctttacaaaattggcgccggcaaacggatt
caggttcttcctatttatggggggcaggacattagccgccaaatccgctcattgaaaaaa
ggcccgcatatcattgtcggtactccagggcgtatcctcgaccatatcaatagaaaaact
atgcgccttgaccaggttcatacagccatccttgatgaagcggatgaaatgttgaacatg
ggcttcattgaagatattgaagcaatcctcgccgagattcctgccgagcggcaaacgctg
ctgttctctgcgactatgccggcacctatccagaggatggccgaaaagttcatgaaagac
ccgcagatcgtccgtgtaaaagcgaaggaaatgactgttccatcaattgaacagtattat
cttgaagtacaggaaaagaataaattcgatgtactgacgaggcttcttgatatccaatct
ccggaactggcgattgtattcggccggacgaaacgccgcgtcgatgaacttgccgaggcg
ttgacactcaggggctatacggcagaggggatccatggggacctgacccaggcaaaacga
atttctgtgttgaggaaattcaaggaaggctcaatcgatgtccttgtcgctacagatgtt
gccgcacgcggactcgatatttcaggcgtcacccatgtatataattttgatattccacag
gatccggaatcgtatgtacacaggatcggccggacaggccgggcgggaaaaacaggcgtt
gctttaacattcatcactccgcgcgaaaagtcctatcttgcagtagttgaaaggacaacg
aagcgcaagatggaaagaatgaagccgccaaccttggatgaagcgcttgaaggacagcaa
aaagcggttgtcgagcggattgaacaaacaattgagtccaataatctccaatactataag
gcagctgccgcggagcttcttgaaaaccatgatgcttcgacagtcgttgcggctgtattg
aaaatgctgacgaaggagccagaccaaactcctgtcaaactgactgaggaagcacctctt
ccgcaaagaagggatcgcgaccgcaagcctttcaacagaggcggccgcggggattccaaa
ggcggttatgaccgccgcaaaggttccggccgttacggggaaaaacgcccatatgaaaag
cgcaccggcggtaagccccgcagctacaataaataa
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