Neobacillus oceani: V1499_03390
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Entry
V1499_03390 CDS
T11220
Name
(GenBank) sigma-54 interaction domain-containing protein
Organism
noce Neobacillus oceani
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS
AAA_5
AAA
PAS_9
Mg_chelatase
PAS_8
AAA_2
SpoVT_C
PAS_4
RWP-RK
AAA_7
AAA_PrkA
AAA_19
HTH_50
MCM
DUF7637
AAA_3
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XOL51806
LinkDB
All DBs
Position
690722..692128
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AA seq
468 aa
AA seq
DB search
MVNVRIDDIPLNWLEEILNLSAERIVVTDRDGIIIYINEAYCEFLGTTVDKAMKRPVQEV
IENTRMHIVSRTGQAEIAAVHHINGSEMIANRFPLIVSGELVGAVGTVMFKNPEELQLYK
SKIQNLVEELKYYKTREESEFTSKYSFSDLIGTSRPFMEAKALAERISVSQSAVLLLGES
GTGKELFAHSIHANSLRSAYPFVPINCASIPEHLLESELFGYEDGAFTGAKKGGKKGHFQ
LANRGTIFLDEIGDMPLAMQSKLLRVLQDKEIQAVGGQKSVPVDVRIITATNRDLEKMVD
EGKFRQDLYYRLNVIKIEIPPLRKRKEDIEQIALKLVEKLEKRFHRKSVRLSQEVIRLLQ
QHSWPGNIRELENVLERCINVLDGNVVMPNHLPLYLRDQETALFDTVPQHANPAGTKIKP
LKETIAEAEKQAILAALAAADGNRQEAAKLLDIGKTSLYEKCRIYSIK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacgtgcgaatcgatgatattcctttaaactggctcgaggaaatattgaacctt
tctgccgagcggattgttgtcaccgaccgtgacggcatcatcatttatattaacgaagct
tattgtgaattccttggcaccactgtggataaagcaatgaaaaggcctgtccaggaggta
attgaaaatacgaggatgcatattgtatcccgcaccggacaagctgaaatcgccgctgtc
caccatatcaacgggagtgaaatgattgccaacagatttcctctcattgtttccggggaa
ctggtcggggcagtgggaacagtcatgttcaagaatcctgaggagcttcaattgtataaa
agcaaaatccaaaatctcgtagaagagttgaaatattataaaacgagagaagagagtgaa
tttacaagcaagtatagcttttcagacctgattgggacgagccggccttttatggaggca
aaagcgcttgccgaaaggatttctgtcagccagtctgctgtcctcctgctcggcgaatcc
ggaacgggaaaggaattgttcgcccattcgattcatgctaacagcctccgttcggcgtat
ccgttcgtaccgataaattgcgcatccattccggaacatttgttggaatccgagctgttt
ggctatgaggacggtgcattcacaggggccaaaaaaggaggaaagaagggtcatttccag
cttgctaatcgggggaccatcttcctggatgaaataggtgacatgccgcttgccatgcaa
agcaaactgctccgtgtattgcaggacaaggaaatccaagccgtcggcggacaaaaatcg
gtaccggtcgatgtaaggattattacggctaccaaccgtgaccttgaaaagatggtagat
gaggggaaattccgccaggacctttactaccggctgaatgtcataaaaatcgaaatcccc
ccgctccggaaaagaaaagaagacatcgagcaaattgccctgaaactggtggaaaagctt
gaaaagagattccaccggaaatccgtgcggctgtcccaggaagtcatccgccttcttcaa
cagcactcctggccgggcaatatacgtgaactcgaaaatgtccttgaacggtgcatcaat
gttttggatgggaatgtcgttatgcccaaccaccttcccttatatttacgggaccaggaa
acagcgctatttgataccgttcctcaacatgcaaatccagccggaacaaagataaagccg
ttaaaggaaacaatagcggaagccgaaaagcaggccatcctcgcagcccttgccgctgcc
gacggaaaccgccaggaagcagccaaactcctcgacatcggaaaaacaagcctttatgaa
aaatgcagaatttattcaattaaataa
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