Neobacillus oceani: V1499_05095
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Entry
V1499_05095 CDS
T11220
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
noce Neobacillus oceani
Brite
KEGG Orthology (KO) [BR:
noce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noce03400
]
V1499_05095 (addA)
Enzymes [BR:
noce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1499_05095 (addA)
DNA repair and recombination proteins [BR:
noce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
V1499_05095 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
DUF2059
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XOL52115
LinkDB
All DBs
Position
1026703..1030482
Genome browser
AA seq
1259 aa
AA seq
DB search
MSKVSIPPMPAGLKWTNDQWRAIKAKDTDILVAAAAGSGKTAVLVERIIQKILSPDDPVD
VDQLLVVTFTNASAAEMRHRIGEALEKAINESPDSRHLRRQLSLLNKASISTLHSFCLDV
VRKYYYLIDVDPGFRIADETEAQLLRDEVLDDLFEEEYGTKDNEPFFRLVDTFTSDRRDD
ALQDIVGAVFDFARSNPDPDRYLDAIVSMYDTGQISKVEQLPFIDALLFDIELQLKSARQ
FAEKAMAVAMLPDGPAAYADALADDIRLIDSLLAVSDSWEALYAAMQTLEFSKAKPIKKG
TADEELKKKAAKFRDKAKKMVTGLRDELFSRRPESFLRDMEEMKPVISTLTGLVRKFSER
FEAAKRERGIVDFSDLEHYCLDILTQGGEEGVRLAPSAAALSYRNQFREVLVDEYQDTNM
VQETILKLVSGGHGESGNLFMVGDVKQSIYRFRLAEPNLFLGKYNRFTKDGTTGGLRIDL
AKNFRSRQEVLDATNYLFRQIMGVKVGEIEYGEDAELKLGADYPDEPFPVELLVIDQGAN
NGAADEDDDEPEGEVLEAEELEQSQLEARAMAARIKEMIASGQPVYEAKTKTTRPIRYRD
IVILLRSMTWAPQIMEEFKQQGLPIYADLSTGYFQATEVAIMMSLLRVIDNPYQDVPLAA
VLRSPIIGLNEAELAFIKIHDKRGSFWDSVIAFCATNPPEEHEGLHEKICRFSEQLEGWR
SIARQGSLSELIWQLYRDTGFYDFAGGLPGGKQRQANLRALYDRGRQYEETSFRGLFRFL
RFIERMMDRGDDLGAARALGEQEDVVRIMTIHSSKGLEFPVVFIAGLARNFNMMDIRSSY
MLDKEFGFASKYINPEKRIAYPSLPQLAFKRKKRMEMLAEEMRVLYVAMTRAKEKLYMLA
TLKDAEKKLSQWEDIASYPDWLLEDADRSAAKGYFDWIGPSLVRHRDGGLLRLSETGPGV
PESISHDGSRWTVTLLDAEDIRGVDEQGEPDGDRLLARVRELQAVPETSSHETEVRERLT
WEYRFQDAAAHRAKQTVSEMKRNRELADEQSGTDLLKKARKTILERPRFMQEKSLSAAER
GTALHSIMQHVRLDQPITEDSIALLASQMVEAELLTEEQREIIEPALIVKFFESELGQRL
LSAEKVYREVPFTASIAAKEVYPDWKDDNEPIYIQGIIDCLFEDREGLVMIDFKSDRITG
RFRSGFEGAAPILADRYRLQIDLYTRALEKIWKRRVDERYLFFFDGAHLLKFERENENV
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtgtcgataccaccgatgccagcgggcctgaaatggacaaacgaccagtgg
agggcaatcaaggcgaaggataccgatatccttgtcgccgcggcagcgggttccggcaaa
acagccgtcctggtcgaacggatcattcaaaaaatactgtctccggacgatcccgttgat
gtcgaccagcttctcgtcgtaacgtttacaaatgcctccgctgcggaaatgcgtcaccgg
attggggaagcgctcgagaaggccattaacgaaagcccggattcaaggcatttgcgcagg
cagctcagccttctgaacaaagcttcaatttccaccctccactccttttgccttgatgtg
gtgaggaaatattattacctgatcgatgtcgatccgggattcaggattgcggatgaaacg
gaagcacagcttctccgcgatgaggtcctcgacgacctgtttgaagaggaatatggaacg
aaggataacgagccgtttttccgtctcgtcgatacctttacttccgacaggagggacgat
gccctgcaggacattgttggggcggttttcgattttgcacgctcgaacccggatccggac
cgatatctggatgccattgtttccatgtatgacacagggcagatttcgaaggttgagcag
ctgccgtttattgatgcgcttctattcgatattgaactccagttgaaaagcgcacggcaa
tttgctgaaaaggcgatggctgtggccatgcttcccgacggtccggcggcttatgcggac
gccttggcggatgatatccggctgattgattcactgcttgctgtcagcgattcgtgggaa
gcgttgtatgcggcgatgcaaacgttggaattttcaaaagcgaagccaatcaaaaaggga
accgcggatgaggaattaaagaaaaaggccgcaaagttccgggataaagcaaagaaaatg
gtgacgggcctcagggatgaattgttttctaggaggcctgaaagctttctgcgcgatatg
gaggaaatgaaaccagtcatctccacgttgaccggcctagtcaggaaattttccgaaagg
ttcgaagcggcgaaaagagaaaggggcatcgtcgatttttccgatcttgagcattattgc
ctcgatatcctcacccagggaggggaagaaggggtgaggcttgctccttccgccgcggcg
ctttcttatcggaaccagttccgtgaagtactggtggatgaataccaggatacaaacatg
gtccaggaaacgattctgaaacttgtttcaggagggcatggcgagagcggaaacctgttc
atggtcggggatgtgaagcaatcaatttatcgtttccggctggcggagccgaacttgttc
ctcggaaaatacaaccgctttacgaaggatggcacgacaggcggattgaggatcgacttg
gcgaaaaacttccgaagcaggcaggaagtccttgatgcgacaaactatttgttcaggcaa
atcatgggcgtaaaagtgggcgaaattgagtacggcgaggatgcggaactgaagcttgga
gccgattatccggatgagccgtttccggtcgagctgcttgtcattgaccagggcgcgaac
aacggcgccgcggatgaagacgatgatgagcccgagggcgaggttcttgaggcggaagaa
ttggagcagtcacagcttgaagccagggcaatggcagccaggataaaggaaatgattgcg
tcggggcaaccggtctatgaagcaaaaacaaaaacaacgaggccaatccgctatcgggac
attgtcattctgctccgttcaatgacatgggcaccgcaaatcatggaagaatttaagcag
caaggacttccgatttatgccgacctgtcaacgggttacttccaggctacagaggttgcg
atcatgatgtccctcctccgggtcattgacaatccgtatcaggatgttccactcgccgcg
gtcctaagatctccaattatcgggttgaacgaagcggaacttgcattcataaaaatccat
gataaaaggggctctttctgggacagtgtcatcgcgttttgcgcaacaaaccctccagag
gagcatgaaggcctccacgaaaaaatctgccgtttcagcgaacagttggaaggatggaga
tcaatcgcaaggcaggggtcactgtcagagcttatctggcagctatacagggatactgga
ttttatgattttgccggcggcctgcctggcgggaagcagcgccaggccaatctccgcgcc
ctttatgacaggggaaggcaatatgaagaaacatcattcaggggattgttcagattcctc
cgcttcattgaacggatgatggaccggggcgatgaccttggcgctgcaagggcgctcggt
gaacaggaagatgttgtccggatcatgacgatccactcaagcaaagggcttgagttcccg
gttgtgttcattgcaggccttgccaggaacttcaatatgatggacattcgcagttcctat
atgctggataaggaattcgggtttgcatcgaaatatatcaatcccgaaaagcggattgcc
tatccttcacttccgcagcttgcattcaaacggaagaaaaggatggaaatgctcgccgag
gagatgcgtgtcctttatgtcgcaatgacccgggcaaaagaaaagctttacatgctggcc
accctgaaggacgccgaaaagaaattaagccagtgggaagatattgcttcctatccggat
tggctcctggaggatgcagacaggtccgcggcgaaagggtattttgactggatcgggccg
tcgcttgtgcgccacagggatggcggcttgcttcgcctctcggaaacgggtccgggagtt
ccggaatcgatatcgcacgatggctcgagatggacagtaacattgcttgacgccgaagat
attagaggggtcgatgagcagggtgaaccggacggggaccgtttattggcgcgcgttcgt
gaacttcaggcggtaccggaaacgtcgagccatgaaacggaagtcagggaaaggctgaca
tgggaatatcgcttccaggatgccgctgcccacagggctaagcagacagtatccgaaatg
aagcggaaccgtgaactggcggatgagcaaagcggaactgatcttctaaaaaaggcgagg
aagacaatcctggagcgcccgcggttcatgcaggaaaaatcactgagcgccgccgaacgc
ggaacagccctgcatagtatcatgcagcacgtgaggctggatcagccaataaccgaggat
tcaatcgcattgctggcaagccaaatggttgaggcggagctgttgaccgaagagcagcgc
gagattatcgaacccgcattgatagtcaaattctttgaatccgaacttggccaaaggctt
ctttcggcagaaaaagtctaccgggaagtaccgtttaccgcttcgattgccgcgaaagaa
gtttatcctgattggaaggatgataatgaaccgatttatatccaaggaatcatagactgt
ctattcgaggatagggaagggcttgtcatgattgatttcaagtctgacaggatcaccggc
cgcttccgcagtgggtttgaaggtgccgcaccgattcttgccgaccgctaccgtcttcaa
attgacttgtatacaagggcactagaaaagatttggaaacgccgggtcgatgagcgctat
ctcttcttcttcgatggcgcccatcttctcaagtttgaaagagaaaacgaaaacgtgtaa
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